RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PHF19Q5T6S3 580 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 FBXO38Q6PIJ6 1188 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 TMPRSS9Q7Z410 1059 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 SLITRK4Q8IW52 837 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 SYTL1Q8IYJ3 562 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 ADGRF3Q8IZF5 1079 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 CENPLQ8N0S6 344 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-217ENST00000575711 CACTIN-AS1Q8N1I8 211 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 CHCHD4Q8N4Q1 142 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 C2orf73Q8N5S3 287 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-217ENST00000575711 DCBLD1Q8N8Z6 715 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 HMGCLL1Q8TB92 370 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 STAG3L4Q8TBR4 150 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 ACMSDQ8TDX5 336 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 DENND1AQ8TEH3 1009 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 MZB1Q8WU39 189 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 KIAA1191Q96A73 305 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 SLC22A18Q96BI1 424 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 NXNL1Q96CM4 212 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 CD180Q99467 661 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 TMEM109Q9BVC6 243 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 PCMTD2Q9NV79 361 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 ARL15Q9NXU5 204 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 UTP6Q9NYH9 597 aaKnown RBP13.54□□□□□ -0.24
RPAIN-217ENST00000575711 EURLQ9NYK6 297 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 ACTR10Q9NZ32 417 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 TMEM9Q9P0T7 183 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 KLHL3Q9UH77 587 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 IGHV5-10-1A0A0J9YXX1 117 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 CCDC189A1A4V9 331 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 ISM1B1AKI9 464 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 CSO75390 466 aaKnown RBP13.53□□□□□ -0.24
RPAIN-217ENST00000575711 RASSF9O75901 435 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 GUCA1CO95843 209 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 C9P02748 559 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 THRAP10827 490 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 ERGP11308 486 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 TFEBP19484 476 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 CCKBRP32239 447 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 PDX1P52945 283 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 PPP1CAP62136 330 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 CDKL1Q00532 357 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 ZFP36L1Q07352 338 aaKnown RBP13.53□□□□□ -0.24
RPAIN-217ENST00000575711 TRA2AQ13595 282 aaKnown RBP eCLIP13.53□□□□□ -0.24
RPAIN-217ENST00000575711 KIR2DS3Q14952 304 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 ACAP2Q15057 778 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 PPP1R3AQ16821 1122 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 ISXQ2M1V0 245 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 KRT71Q3SY84 523 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 SNAP47Q5SQN1 464 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 ZNF574Q6ZN55 896 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-217ENST00000575711 FAM92BQ6ZTR7 304 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 TMPRSS7Q7RTY8 843 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 B3GNT8Q7Z7M8 397 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 CROCCP2Q86T23 111 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 ISCA2Q86U28 154 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 TAX1BP1Q86VP1 789 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 GPSM1Q86YR5 675 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 IQCKQ8N0W5 287 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 CYP4X1Q8N118 509 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 LINC01555Q8NAE3 123 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 ZNF480Q8WV37 535 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 ATL1Q8WXF7 558 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 PTERQ96BW5 349 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 GRAMD1AQ96CP6 724 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 CCDC74BQ96LY2 380 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 ZIM3Q96PE6 472 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 EGFL8Q99944 293 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 STRADBQ9C0K7 418 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 SEMA6CQ9H3T2 930 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 ALG9Q9H6U8 611 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 STOX2Q9P2F5 926 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-217ENST00000575711 LGALS13Q9UHV8 139 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 POMT2Q9UKY4 750 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 RNF112Q9ULX5 631 aa13.53□□□□□ -0.24
RPAIN-217ENST00000575711 A0A1W2PPM1 405 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 TLCD2A6NGC4 264 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 A8MU76 341 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 GOLGA8RI6L899 631 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 TOX3O15405 576 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-217ENST00000575711 HYAL3O43820 417 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-217ENST00000575711 ANXA5P08758 320 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 IMPA1P29218 277 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 PRDX3P30048 256 aaKnown RBP13.52□□□□□ -0.25
RPAIN-217ENST00000575711 GLRBP48167 497 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 KPNA2P52292 529 aaKnown RBP13.52□□□□□ -0.25
RPAIN-217ENST00000575711 ZNF844Q08AG5 666 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 TARDBPQ13148 414 aaKnown RBP eCLIP13.52□□□□□ -0.25
RPAIN-217ENST00000575711 TSTA3Q13630 321 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-217ENST00000575711 FASTKQ14296 549 aaKnown RBP13.52□□□□□ -0.25
RPAIN-217ENST00000575711 TGFBIQ15582 683 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 OR4D1Q15615 310 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 CEP85LQ5SZL2 805 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 CACHD1Q5VU97 1274 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 AGTRAPQ6RW13 159 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 LRIG3Q6UXM1 1119 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 MBOAT1Q6ZNC8 495 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 PRSS42Q7Z5A4 293 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 CLEC14AQ86T13 490 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 LCA5Q86VQ0 697 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms