RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ATOH8Q96SQ7 321 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 RAB33BQ9H082 229 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 XKR8Q9H6D3 395 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 OGFRQ9NZT2 677 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 CIDEBQ9UHD4 219 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 ENTPD2Q9Y5L3 495 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 SPAARA0A1B0GVQ0 90 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 OR6C74A6NCV1 312 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 NTN3O00634 580 aaPredicted RBP16.55■□□□□ 0.24
NUP88-210ENST00000574867 COPEO14579 308 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 CPNE6O95741 557 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 TOP3BO95985 862 aaKnown RBP16.55■□□□□ 0.24
NUP88-210ENST00000574867 CD1CP29017 333 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 HNMTP50135 292 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 CCL7P80098 99 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 WDR74Q6RFH5 385 aaPredicted RBP16.55■□□□□ 0.24
NUP88-210ENST00000574867 C4orf33Q8N1A6 199 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 FBXL8Q96CD0 374 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 APOPT1Q96IL0 206 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 IL17FQ96PD4 163 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 GFM1Q96RP9 751 aaKnown RBP16.55■□□□□ 0.24
NUP88-210ENST00000574867 MRPL57Q9BQC6 102 aaKnown RBP16.55■□□□□ 0.24
NUP88-210ENST00000574867 TWSG1Q9GZX9 223 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 MRPL46Q9H2W6 279 aaKnown RBP16.55■□□□□ 0.24
NUP88-210ENST00000574867 ACBD3Q9H3P7 528 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 HRASLS2Q9NWW9 162 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 NUDT4Q9NZJ9 180 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 STOX2Q9P2F5 926 aaPredicted RBP16.55■□□□□ 0.24
NUP88-210ENST00000574867 EPHA6Q9UF33 1036 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 ACTL7BQ9Y614 415 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 DMXL1Q9Y485 3027 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 A0A1W2PQM1 296 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 KRT87PA6NCN2 255 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 MAP2K7O14733 419 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 OPA1O60313 960 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 S100BP04271 92 aaPredicted RBP16.55■□□□□ 0.24
NUP88-210ENST00000574867 TYRP1P17643 537 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 IMPA1P29218 277 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 PNLIPRP1P54315 467 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 SPIDRQ14159 915 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 PLXDC1Q8IUK5 500 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 SYTL1Q8IYJ3 562 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 ADGRF3Q8IZF5 1079 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 TCAIMQ8N3R3 496 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 LINC01555Q8NAE3 123 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 PDPRQ8NCN5 879 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 ZNF480Q8WV37 535 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 SLC22A18Q96BI1 424 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 SCYL1Q96KG9 808 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 EGFL8Q99944 293 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 SYNDIG1Q9H7V2 258 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 ZNF358Q9NW07 568 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 XPR1Q9UBH6 696 aa16.55■□□□□ 0.24
NUP88-210ENST00000574867 MN1Q10571 1320 aaPredicted RBP16.54■□□□□ 0.24
NUP88-210ENST00000574867 C2orf74A8MZ97 194 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 D6RAR5 112 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 GUCA1CO95843 209 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 CHRM5P08912 532 aaPredicted RBP16.54■□□□□ 0.24
NUP88-210ENST00000574867 CRHR1P34998 444 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 KIR2DS3Q14952 304 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 CCDC157Q569K6 752 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 NKAIN2Q5VXU1 208 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 MBOAT1Q6ZNC8 495 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 SMPDL3AQ92484 453 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 IQCGQ9H095 443 aaKnown RBP16.54■□□□□ 0.24
NUP88-210ENST00000574867 TMBIM4Q9HC24 238 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 CD274Q9NZQ7 290 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 GRID1Q9ULK0 1009 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 TMCO1Q9UM00 188 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 PIPSLA2A3N6 862 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 SUPT3HB4E1H0 165 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 AGPSO00116 658 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 BTN3A3O00478 584 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 GIPC1O14908 333 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 SUPT3HO75486 399 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 CCND1P24385 295 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 CSF2RBP32927 897 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 AGTRAPQ6RW13 159 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 BANPQ8N9N5 519 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 NCSTNQ92542 709 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 EXT2Q93063 718 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 ZDHHC12Q96GR4 267 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 CD180Q99467 661 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 SSU72Q9NP77 194 aaKnown RBP16.54■□□□□ 0.24
NUP88-210ENST00000574867 TMEM216Q9P0N5 145 aa16.54■□□□□ 0.24
NUP88-210ENST00000574867 ANKRD12Q6UB98 2062 aa16.53■□□□□ 0.24
NUP88-210ENST00000574867 GSAPA4D1B5 854 aa16.53■□□□□ 0.24
NUP88-210ENST00000574867 E7ENX8 843 aa16.53■□□□□ 0.24
NUP88-210ENST00000574867 POLR2CP19387 275 aaPredicted RBP16.53■□□□□ 0.24
NUP88-210ENST00000574867 HOXD11P31277 338 aaPredicted RBP16.53■□□□□ 0.24
NUP88-210ENST00000574867 TAP2Q03519 686 aa16.53■□□□□ 0.24
NUP88-210ENST00000574867 PUM1Q14671 1186 aaKnown RBP eCLIP16.53■□□□□ 0.24
NUP88-210ENST00000574867 CCDC153Q494R4 210 aa16.53■□□□□ 0.24
NUP88-210ENST00000574867 SULT1C3Q6IMI6 304 aa16.53■□□□□ 0.24
NUP88-210ENST00000574867 GOLGA6L1Q8N7Z2 621 aa16.53■□□□□ 0.24
NUP88-210ENST00000574867 OR4D9Q8NGE8 314 aa16.53■□□□□ 0.24
NUP88-210ENST00000574867 NRTNQ99748 197 aa16.53■□□□□ 0.24
NUP88-210ENST00000574867 CCDC177Q9NQR7 707 aaPredicted RBP16.53■□□□□ 0.24
NUP88-210ENST00000574867 POMT2Q9UKY4 750 aa16.53■□□□□ 0.24
NUP88-210ENST00000574867 NCF1BA6NI72 391 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms