RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ZC3H14Q6PJT7 736 aaKnown RBP23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 CPLX4Q7Z7G2 160 aa23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 TRIM48Q8IWZ4 208 aa23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 TEX9Q8N6V9 391 aa23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 SLC37A2Q8TED4 501 aa23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 TRPC4APQ8TEL6 797 aa23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 MENTQ9BUN1 341 aa23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 ZBTB26Q9HCK0 441 aa23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 ABCF3Q9NUQ8 709 aa23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 PPP6CO00743 305 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 WDR47O94967 919 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 EPN2O95208 641 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 PNLIPRP1P54315 467 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 CLCQ05315 142 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 FASTKQ14296 549 aaKnown RBP23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 HLA-BQ31612 363 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 GOLGA7Q7Z5G4 137 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 SFRP1Q8N474 314 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 C2orf73Q8N5S3 287 aaPredicted RBP23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 OR52E1Q8NGJ3 308 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 JPH3Q8WXH2 748 aaPredicted RBP23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 LRFN3Q9BTN0 628 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 ARRDC1-AS1Q9H2J1 176 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 SMOC1Q9H4F8 434 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 XKR8Q9H6D3 395 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 ARHGEF17Q96PE2 2063 aaPredicted RBP23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 KIR2DS5A0A0G2JLQ3 304 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 A0A0G2JNG1 304 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 K7EPI3 171 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 KIR2DS3K7RE56 304 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 UBFD1O14562 309 aaKnown RBP23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 ANXA6P08133 673 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 SLC2A4P14672 509 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 NDUFS1P28331 727 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 SERPINB5P36952 375 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 MPLP40238 635 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 RXRGP48443 463 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 TSTA3Q13630 321 aaPredicted RBP23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 GTF2H2Q13888 395 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 KIR2DS5Q14953 304 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 GTF2H2CQ6P1K8 395 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 AGR3Q8TD06 166 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 C7orf26Q96N11 449 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 IL21RQ9HBE5 538 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 CPNE7Q9UBL6 633 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 RAB23Q9ULC3 237 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 SLC22A14Q9Y267 594 aa23.32■■□□□ 1.32
ATPAF1-213ENST00000574428 OR5K4A6NMS3 321 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 MPSTP25325 297 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 TBPL1P62380 186 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 RBBP7Q16576 425 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 ZNF423Q2M1K9 1284 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 SLC23A3Q6PIS1 610 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 LRRC70Q7Z2Q7 622 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 SLC25A45Q8N413 288 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 ZNF781Q8N8C0 355 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 OR56A3Q8NH54 315 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 LOXL4Q96JB6 756 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 TRMOQ9BU70 441 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 SLC32A1Q9H598 525 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 KIR3DX1Q9H7L2 352 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 SLC40A1Q9NP59 571 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 LNPEPQ9UIQ6 1025 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 SLC6A14Q9UN76 642 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 ICKQ9UPZ9 632 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 ANGPTL3Q9Y5C1 460 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 PI4KAP42356 2102 aa23.31■■□□□ 1.32
ATPAF1-213ENST00000574428 A0A1B0GTL3 188 aa23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 E7ENX8 843 aa23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 ERGP11308 486 aa23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 XRCC1P18887 633 aaPredicted RBP23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 UBE2IP63279 158 aaKnown RBP23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 TAP2Q03519 686 aa23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 LCP2Q13094 533 aa23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 METTL2BQ6P1Q9 378 aaKnown RBP23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 SUSD1Q6UWL2 747 aa23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 SDR16C5Q8N3Y7 309 aa23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 SNX31Q8N9S9 440 aa23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 OR2I1PQ8NGU4 316 aa23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 NOL11Q9H8H0 719 aaKnown RBP23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 TNFRSF12AQ9NP84 129 aa23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 INTS7Q9NVH2 962 aaKnown RBP23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 SPATA7Q9P0W8 599 aa23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 MARCOQ9UEW3 520 aaPredicted RBP23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 DMDP11532 3685 aa23.3■■□□□ 1.32
ATPAF1-213ENST00000574428 A0A1B0GTQ1 180 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 EBAG9O00559 213 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 VIPP01282 170 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 EPHA8P29322 1005 aaPredicted RBP23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 PKLRP30613 574 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 MAZP56270 477 aaKnown RBP23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 SF3A3Q12874 501 aaKnown RBP eCLIP23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 CYP2A13Q16696 494 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 FAM219BQ5XKK7 198 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 THOC6Q86W42 341 aaKnown RBP23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 CRLF3Q8IUI8 442 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 LRRC56Q8IYG6 542 aaPredicted RBP23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 MAPK15Q8TD08 544 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 GAREM1Q9H706 876 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 POT1Q9NUX5 634 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms