RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 INTS7Q9NVH2 962 aaKnown RBP27.64■■■□□ 2.02
CTDNEP1-210ENST00000574322 NOP53Q9NZM5 478 aaKnown RBP27.64■■■□□ 2.02
CTDNEP1-210ENST00000574322 WNT16Q9UBV4 365 aa27.64■■■□□ 2.02
CTDNEP1-210ENST00000574322 SNX6Q9UNH7 406 aa27.64■■■□□ 2.02
CTDNEP1-210ENST00000574322 ATG2BQ96BY7 2078 aa27.64■■■□□ 2.02
CTDNEP1-210ENST00000574322 PRAMEF4O60810 478 aa27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 IMPA1P29218 277 aa27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 DPP6P42658 865 aa27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 ADPRHP54922 357 aa27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 MAD2L1Q13257 205 aaPredicted RBP27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 INPP5AQ14642 412 aa27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 MLF2Q15773 248 aaPredicted RBP27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 ZNF423Q2M1K9 1284 aa27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 PRAMEF9Q5VWM5 478 aa27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 UNC5DQ6UXZ4 953 aa27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 AMZ2Q86W34 360 aa27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 THOC6Q86W42 341 aaKnown RBP27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 FOXJ1Q92949 421 aa27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 STMN2Q93045 179 aa27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 WDR26Q9H7D7 661 aa27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 L3MBTL1Q9Y468 752 aa27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 PCYT1BQ9Y5K3 369 aaPredicted RBP27.64■■■□□ 2.01
CTDNEP1-210ENST00000574322 KRT87PA6NCN2 255 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 SLC22A3O75751 556 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 SLC16A8O95907 504 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 PAK4O96013 591 aaPredicted RBP27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 CAPN3P20807 821 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 ITPKAP23677 461 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 PRPH2P23942 346 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 PSME3P61289 254 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 SGCGQ13326 291 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 E2F2Q14209 437 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 NFE2L1Q14494 772 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 FBXO43Q4G163 708 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 KBTBD6Q86V97 674 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 OR14C36Q8NHC7 312 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 GANCQ8TET4 914 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 SLC17A9Q9BYT1 436 aa27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 FARSBQ9NSD9 589 aaKnown RBP27.63■■■□□ 2.01
CTDNEP1-210ENST00000574322 DYTNA2CJ06 578 aa27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 JUPP14923 745 aa27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 GNPDA1P46926 289 aa27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 ZXDAP98168 799 aa27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 RFTN2Q52LD8 501 aaPredicted RBP27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 FAM83HQ6ZRV2 1179 aaPredicted RBP27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 RETREG3Q86VR2 466 aa27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 HORMAD1Q86X24 394 aa27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 JADE3Q92613 823 aa27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 HBEGFQ99075 208 aa27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 C1orf50Q9BV19 199 aa27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 C1QTNF7Q9BXJ2 289 aa27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 MRPL40Q9NQ50 206 aaKnown RBP27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 PHPT1Q9NRX4 125 aaPredicted RBP27.62■■■□□ 2.01
CTDNEP1-210ENST00000574322 A0A1W2PP18 115 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 A0A1W2PQU0 124 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 FAM234BA2RU67 622 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 NR5A2O00482 541 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 RNGTTO60942 597 aaKnown RBP27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 NME5P56597 212 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 NAE1Q13564 534 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 CPSF6Q16630 551 aaKnown RBP eCLIP27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 AAGABQ6PD74 315 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 GALNT13Q8IUC8 556 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 RGL4Q8IZJ4 473 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 PROKR1Q8TCW9 393 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 ZDHHC5Q9C0B5 715 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 GPRC5BQ9NZH0 403 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 MAP10Q9P2G4 905 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 STX18Q9P2W9 335 aaKnown RBP27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 ZNHIT2Q9UHR6 403 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 ANKRD28O15084 1053 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 KMOO15229 486 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 KRT36O76013 467 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 PCSK2P16519 638 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 CASP2P42575 452 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 UFM1P61960 85 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 SFSWAPQ12872 951 aaKnown RBP27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 CHIT1Q13231 466 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 CEACAM7Q14002 265 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 PDZD3Q86UT5 571 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 OR9A1PQ8NGU1 263 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 SPDL1Q96EA4 605 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 SIPA1Q96FS4 1042 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 TEX37Q96LM6 180 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 SLC6A17Q9H1V8 727 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 ITM2CQ9NQX7 267 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 CROTQ9UKG9 612 aa27.61■■■□□ 2.01
CTDNEP1-210ENST00000574322 SHISA7A6NL88 538 aa27.6■■■□□ 2.01
CTDNEP1-210ENST00000574322 FKBP6O75344 327 aa27.6■■■□□ 2.01
CTDNEP1-210ENST00000574322 SORBS2O94875 1100 aaKnown RBP27.6■■■□□ 2.01
CTDNEP1-210ENST00000574322 MYCLP1P12525 358 aaPredicted RBP27.6■■■□□ 2.01
CTDNEP1-210ENST00000574322 GNAZP19086 355 aa27.6■■■□□ 2.01
CTDNEP1-210ENST00000574322 GCKP35557 465 aa27.6■■■□□ 2.01
CTDNEP1-210ENST00000574322 THOP1P52888 689 aa27.6■■■□□ 2.01
CTDNEP1-210ENST00000574322 PRKCQQ04759 706 aa27.6■■■□□ 2.01
CTDNEP1-210ENST00000574322 VPS26BQ4G0F5 336 aa27.6■■■□□ 2.01
CTDNEP1-210ENST00000574322 IL23RQ5VWK5 629 aa27.6■■■□□ 2.01
CTDNEP1-210ENST00000574322 METRNLQ641Q3 311 aa27.6■■■□□ 2.01
CTDNEP1-210ENST00000574322 DOK6Q6PKX4 331 aa27.6■■■□□ 2.01
CTDNEP1-210ENST00000574322 ZFAND4Q86XD8 727 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms