RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 CACHD1Q5VU97 1274 aa32.04■■■□□ 2.72
CTDNEP1-209ENST00000574205 RAB11FIP2Q7L804 512 aa32.04■■■□□ 2.72
CTDNEP1-209ENST00000574205 SLC22A18Q96BI1 424 aa32.04■■■□□ 2.72
CTDNEP1-209ENST00000574205 SPHK1Q9NYA1 384 aa32.04■■■□□ 2.72
CTDNEP1-209ENST00000574205 SLC16A8O95907 504 aa32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 ENO2P09104 434 aaPredicted RBP32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 HIST1H2AGP0C0S8 130 aaPredicted RBP32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 HIST1H2ADP20671 130 aa32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 TYK2P29597 1187 aa32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 CSTF2P33240 577 aaKnown RBP eCLIP32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 SLC26A3P40879 764 aa32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 PHKG1Q16816 387 aa32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 TBC1D1Q86TI0 1168 aaPredicted RBP32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 AGBL5Q8NDL9 886 aa32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 ISL2Q96A47 359 aa32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 HIST1H2AHQ96KK5 128 aa32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 HIST1H2AJQ99878 128 aa32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 H2AFJQ9BTM1 129 aa32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 ZNF768Q9H5H4 540 aaKnown RBP32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 NOVA2Q9UNW9 492 aaKnown RBP32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 ACOT9Q9Y305 439 aa32.03■■■□□ 2.72
CTDNEP1-209ENST00000574205 PABPN1LA6NDY0 278 aaKnown RBP32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 ZNF839A8K0R7 811 aa32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 FOXK2Q01167 660 aa32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 C3orf38Q5JPI3 329 aa32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 SBSNQ6UWP8 590 aa32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 CCDC138Q96M89 665 aa32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 TRIM54Q9BYV2 358 aa32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 PPCSQ9HAB8 311 aa32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 C1GALT1Q9NS00 363 aa32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 PSMC3IPQ9P2W1 217 aaPredicted RBP32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 TLK1Q9UKI8 766 aa32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 IKZF3Q9UKT9 509 aa32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 SATB2Q9UPW6 733 aa32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 LOXL2Q9Y4K0 774 aa32.02■■■□□ 2.72
CTDNEP1-209ENST00000574205 SHBGP04278 402 aa32.01■■■□□ 2.72
CTDNEP1-209ENST00000574205 C2P06681 752 aa32.01■■■□□ 2.72
CTDNEP1-209ENST00000574205 SNRPAP09012 282 aaKnown RBP32.01■■■□□ 2.72
CTDNEP1-209ENST00000574205 PEBP1P30086 187 aaKnown RBP32.01■■■□□ 2.72
CTDNEP1-209ENST00000574205 AP1S2P56377 157 aa32.01■■■□□ 2.72
CTDNEP1-209ENST00000574205 ATP6V0D1P61421 351 aa32.01■■■□□ 2.72
CTDNEP1-209ENST00000574205 CSHL1Q14406 222 aa32.01■■■□□ 2.72
CTDNEP1-209ENST00000574205 TAF1BQ53T94 588 aaPredicted RBP32.01■■■□□ 2.72
CTDNEP1-209ENST00000574205 SPESP1Q6UW49 350 aa32.01■■■□□ 2.72
CTDNEP1-209ENST00000574205 ADAMTSL2Q86TH1 951 aa32.01■■■□□ 2.72
CTDNEP1-209ENST00000574205 OR2A14Q96R47 310 aa32.01■■■□□ 2.72
CTDNEP1-209ENST00000574205 CTNNAL1Q9UBT7 734 aa32.01■■■□□ 2.72
CTDNEP1-209ENST00000574205 A0A087X1B8 175 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 IGHV5-51A0A0C4DH38 117 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 A0A1W2PNU3 283 aaPredicted RBP32■■■□□ 2.71
CTDNEP1-209ENST00000574205 ISM1B1AKI9 464 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 CDC7O00311 574 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 PLD2O14939 933 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 CD1DP15813 335 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 UGT2B7P16662 529 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 CDH3P22223 829 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 PNLIPRP1P54315 467 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 PPP1R3AQ16821 1122 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 SPATA6LQ8N4H0 392 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 C2orf73Q8N5S3 287 aaPredicted RBP32■■■□□ 2.71
CTDNEP1-209ENST00000574205 LMNTD1Q8N9Z9 388 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 FLVCR1-AS1Q8TAF5 88 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 ZNF480Q8WV37 535 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 KLHL6Q8WZ60 621 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 MTBPQ96DY7 904 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 PITPNM3Q9BZ71 974 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 POLR1BQ9H9Y6 1135 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 PCDHGA8Q9Y5G5 932 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 NPEPPSL1A6NEC2 478 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 TRIM49D1C9J1S8 452 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 MAGEA12P43365 314 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 SEPHS1P49903 392 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 TSNQ15631 228 aaKnown RBP32■■■□□ 2.71
CTDNEP1-209ENST00000574205 FBXO38Q6PIJ6 1188 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 TAX1BP1Q86VP1 789 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 KMT5CQ86Y97 462 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 FBXO39Q8N4B4 442 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 MREGQ8N565 214 aa32■■■□□ 2.71
CTDNEP1-209ENST00000574205 A0A096LPK6 155 aa31.99■■■□□ 2.71
CTDNEP1-209ENST00000574205 TRABD2BA6NFA1 517 aa31.99■■■□□ 2.71
CTDNEP1-209ENST00000574205 MPOP05164 745 aa31.99■■■□□ 2.71
CTDNEP1-209ENST00000574205 NUDT17P0C025 328 aa31.99■■■□□ 2.71
CTDNEP1-209ENST00000574205 IMPA1P29218 277 aa31.99■■■□□ 2.71
CTDNEP1-209ENST00000574205 LSSP48449 732 aa31.99■■■□□ 2.71
CTDNEP1-209ENST00000574205 FASTKQ14296 549 aaKnown RBP31.99■■■□□ 2.71
CTDNEP1-209ENST00000574205 RTP5Q14D33 572 aa31.99■■■□□ 2.71
CTDNEP1-209ENST00000574205 SYTL1Q8IYJ3 562 aa31.99■■■□□ 2.71
CTDNEP1-209ENST00000574205 SMPDL3AQ92484 453 aa31.99■■■□□ 2.71
CTDNEP1-209ENST00000574205 NXPE2Q96DL1 559 aa31.99■■■□□ 2.71
CTDNEP1-209ENST00000574205 PPM1MQ96MI6 270 aa31.99■■■□□ 2.71
CTDNEP1-209ENST00000574205 ARL15Q9NXU5 204 aa31.99■■■□□ 2.71
CTDNEP1-209ENST00000574205 PCM1Q15154 2024 aa31.98■■■□□ 2.71
CTDNEP1-209ENST00000574205 SNRNP200O75643 2136 aaKnown RBP31.98■■■□□ 2.71
CTDNEP1-209ENST00000574205 AKAP13Q12802 2813 aa31.98■■■□□ 2.71
CTDNEP1-209ENST00000574205 IQANK1A0A1B0GTG1 560 aa31.98■■■□□ 2.71
CTDNEP1-209ENST00000574205 AGRPO00253 132 aa31.98■■■□□ 2.71
CTDNEP1-209ENST00000574205 ZBTB11O95625 1053 aaPredicted RBP31.98■■■□□ 2.71
CTDNEP1-209ENST00000574205 LTA4HP09960 611 aaKnown RBP31.98■■■□□ 2.71
CTDNEP1-209ENST00000574205 GABREP78334 506 aa31.98■■■□□ 2.71
CTDNEP1-209ENST00000574205 SLC5A12Q1EHB4 618 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms