RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 TPRKBQ9Y3C4 175 aa15.27■□□□□ 0.04
NUP88-207ENST00000573584 PCDHGA4Q9Y5G9 962 aa15.27■□□□□ 0.04
NUP88-207ENST00000573584 PCDHGA10Q9Y5H3 936 aa15.27■□□□□ 0.04
NUP88-207ENST00000573584 A0A096LPI6 279 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 ADAMTS4O75173 837 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 ZNF682O95780 498 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 HOXB6P17509 224 aaKnown RBP15.27■□□□□ 0.03
NUP88-207ENST00000573584 ATF6P18850 670 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 CD6P30203 668 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 VBP1P61758 197 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 RPS14P62263 151 aaKnown RBP15.27■□□□□ 0.03
NUP88-207ENST00000573584 DGCR6Q14129 220 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 ARHGEF7Q14155 803 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 DGUOKQ16854 277 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 CARD16Q5EG05 197 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 PAGE2BQ5JRK9 111 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 LRIF1Q5T3J3 769 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 CCDC81Q6ZN84 652 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 RNF165Q6ZSG1 346 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 USP7Q93009 1102 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 REXO5Q96IC2 774 aaKnown RBP15.27■□□□□ 0.03
NUP88-207ENST00000573584 BCL7BQ9BQE9 202 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 NECTIN3Q9NQS3 549 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 LATS2Q9NRM7 1088 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 DLGAP4Q9Y2H0 992 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 TRIM17Q9Y577 477 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 RPS3P23396 243 aaKnown RBP eCLIP15.27■□□□□ 0.03
NUP88-207ENST00000573584 EIF2B2P49770 351 aaKnown RBP15.27■□□□□ 0.03
NUP88-207ENST00000573584 ARHGDIAP52565 204 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 IFITM3Q01628 133 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 ATXN7L2Q5T6C5 722 aaPredicted RBP15.27■□□□□ 0.03
NUP88-207ENST00000573584 CXorf57Q6NSI4 855 aaKnown RBP15.27■□□□□ 0.03
NUP88-207ENST00000573584 MBOAT1Q6ZNC8 495 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 LINC00299Q6ZSB3 139 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 CHST9Q7L1S5 443 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 ZBTB2Q8N680 514 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 POP5Q969H6 163 aaKnown RBP15.27■□□□□ 0.03
NUP88-207ENST00000573584 DUSP21Q9H596 190 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 RMND5AQ9H871 391 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 SCN3BQ9NY72 215 aa15.27■□□□□ 0.03
NUP88-207ENST00000573584 MYO1GB0I1T2 1018 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 FZD6O60353 706 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 B3GALT4O96024 378 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 SERPINB10P48595 397 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 RHOAP61586 193 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 SLC35A2P78381 396 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 INAQ16352 499 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 PGS1Q32NB8 556 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 MFSD14CQ5VZR4 134 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 CEP68Q76N32 757 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 ADCK1Q86TW2 530 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 P2RY8Q86VZ1 359 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 TRIB2Q92519 343 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 ACPTQ9BZG2 426 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 TNKS2Q9H2K2 1166 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 ATP13A3Q9H7F0 1226 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 LHX3Q9UBR4 397 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 FCF1Q9Y324 198 aaKnown RBP15.26■□□□□ 0.03
NUP88-207ENST00000573584 TRIM43BA6NCK2 446 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 COCHO43405 550 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 JRKO75564 520 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 STK16O75716 305 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 KRT6AP02538 564 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 KRT6BP04259 564 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 ACVR2AP27037 513 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 PSMB9P28065 219 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 CTGFP29279 349 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 CDKN2CP42773 168 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 MAGEA2P43356 314 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 KRT6CP48668 564 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 CLK3P49761 638 aaKnown RBP15.26■□□□□ 0.03
NUP88-207ENST00000573584 DAPP51397 102 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 CLDN8P56748 225 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 ABHD18Q0P651 414 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 NFATC2Q13469 925 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 TSSK3Q96PN8 268 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 ABCG2Q9UNQ0 655 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 SAMD4AQ9UPU9 718 aaKnown RBP15.26■□□□□ 0.03
NUP88-207ENST00000573584 MAN2B2Q9Y2E5 1009 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 WDR37Q9Y2I8 494 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 GMPPBQ9Y5P6 360 aa15.26■□□□□ 0.03
NUP88-207ENST00000573584 GAPDHSO14556 408 aaPredicted RBP15.25■□□□□ 0.03
NUP88-207ENST00000573584 WNT9AO14904 365 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 SEPT4O43236 478 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 STC2O76061 302 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 CCNDBP1O95273 360 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 CLDN9O95484 217 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 IRF1P10914 325 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 JUNDP17535 347 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 FUT4P22083 530 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 FAM189BP81408 668 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 RTP2Q5QGT7 225 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 HECTD3Q5T447 861 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 ADGRF1Q5T601 910 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 GPRC6AQ5T6X5 926 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 ARMC12Q5T9G4 340 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 DOK6Q6PKX4 331 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 ZNF540Q8NDQ6 660 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 YIPF6Q96EC8 236 aa15.25■□□□□ 0.03
NUP88-207ENST00000573584 VWA8A3KMH1 1905 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms