RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 TRIM73Q86UV7 250 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 RELL1Q8IUW5 271 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 BMPERQ8N8U9 685 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 EEF1AKMT1Q8WVE0 214 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 SLC46A1Q96NT5 459 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 CD180Q99467 661 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 RBBP8Q99708 897 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 TSPYL1Q9H0U9 437 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 THSD1Q9NS62 852 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 SIDT1Q9NXL6 827 aaKnown RBP15.3■□□□□ 0.04
CHD3-215ENST00000572750 OR6C2Q9NZP2 312 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 FOXJ2Q9P0K8 574 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 VWA7Q9Y334 891 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 PIPSLA2A3N6 862 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 CDRT15L2A8MXV6 281 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 C2orf74A8MZ97 194 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 TOX3O15405 576 aaPredicted RBP15.29■□□□□ 0.04
CHD3-215ENST00000572750 PRAMEF10O60809 474 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 TSPAN12O95859 305 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 CATP04040 527 aaKnown RBP15.29■□□□□ 0.04
CHD3-215ENST00000572750 MPC1LP0DKB6 136 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 PVRP15151 417 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 UGT2B7P16662 529 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 CD9P21926 228 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 CDH3P22223 829 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 PRDX3P30048 256 aaKnown RBP15.29■□□□□ 0.04
CHD3-215ENST00000572750 PHBP35232 272 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 GP5P40197 560 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 SKIV2L2P42285 1042 aaKnown RBP15.29■□□□□ 0.04
CHD3-215ENST00000572750 RGS4P49798 205 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 TAS2R39P59534 338 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 TTC23LQ6PF05 361 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 SPESP1Q6UW49 350 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 CYS1Q717R9 158 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 LSMEM2Q8N112 164 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 DENND1AQ8TEH3 1009 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 KLHL6Q8WZ60 621 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 UBXN4Q92575 508 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 USP7Q93009 1102 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 RAD51AP1Q96B01 352 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 MRRFQ96E11 262 aaKnown RBP15.29■□□□□ 0.04
CHD3-215ENST00000572750 CTRCQ99895 268 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 KLHL25Q9H0H3 589 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 PRORYQ9H606 182 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 CAB39LQ9H9S4 337 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 ADAMTS6Q9UKP5 1117 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 SLC39A10Q9ULF5 831 aa15.29■□□□□ 0.04
CHD3-215ENST00000572750 MTO1Q9Y2Z2 717 aaKnown RBP15.29■□□□□ 0.04
CHD3-215ENST00000572750 B4E171 279 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 C9orf172C9J069 976 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 MYO1CO00159 1063 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 EIF3FO00303 357 aaPredicted RBP15.28■□□□□ 0.04
CHD3-215ENST00000572750 SYF2O95926 243 aaKnown RBP15.28■□□□□ 0.04
CHD3-215ENST00000572750 FAM153BP0C7A2 387 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 EBLN1P0CF75 366 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 MYBL2P10244 700 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 ZNF37AP17032 561 aaPredicted RBP15.28■□□□□ 0.04
CHD3-215ENST00000572750 NELFEP18615 380 aaKnown RBP15.28■□□□□ 0.04
CHD3-215ENST00000572750 TSPAN7P41732 249 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 ERVPABLB-1P60509 514 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 NAB1Q13506 487 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 FAM153CQ494X1 144 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 ANKS6Q68DC2 871 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 LRRC8EQ6NSJ5 796 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 CYHR1Q6ZMK1 362 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 UBE2R2Q712K3 238 aaPredicted RBP15.28■□□□□ 0.04
CHD3-215ENST00000572750 CLEC14AQ86T13 490 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 CEP97Q8IW35 865 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 FAM20CQ8IXL6 584 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 MYO1HQ8N1T3 1032 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 OR2L8Q8NGY9 312 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 FLVCR1-AS1Q8TAF5 88 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 MAGEC3Q8TD91 643 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 ASB11Q8WXH4 323 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 RNF31Q96EP0 1072 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 SLC41A2Q96JW4 573 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 ZNF578Q96N58 590 aaPredicted RBP15.28■□□□□ 0.04
CHD3-215ENST00000572750 GPR22Q99680 433 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 RAB11FIP5Q9BXF6 653 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 PITPNM3Q9BZ71 974 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 APMAPQ9HDC9 416 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 SOHLH2Q9NX45 425 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 SLC39A1Q9NY26 324 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 SEMA5BQ9P283 1151 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 SDK2Q58EX2 2172 aa15.28■□□□□ 0.04
CHD3-215ENST00000572750 SLC9B1P1A6NJY1 282 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 ISM1B1AKI9 464 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 ZBTB11O95625 1053 aaPredicted RBP15.27■□□□□ 0.04
CHD3-215ENST00000572750 ST6GAL1P15907 406 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 PSMB5P28074 263 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 SLC5A2P31639 672 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 MLLT3P42568 568 aaPredicted RBP15.27■□□□□ 0.04
CHD3-215ENST00000572750 ARL4DP49703 201 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 IL2P60568 153 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 FOXM1Q08050 763 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 FASTKQ14296 549 aaKnown RBP15.27■□□□□ 0.04
CHD3-215ENST00000572750 SLMAPQ14BN4 828 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 UAP1Q16222 522 aaPredicted RBP15.27■□□□□ 0.04
CHD3-215ENST00000572750 TMEM207Q6UWW9 146 aa15.27■□□□□ 0.04
CHD3-215ENST00000572750 MBOAT1Q6ZNC8 495 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms