RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 DHRS4Q9BTZ2 278 aa19.98■□□□□ 0.79
VPS53-210ENST00000571456 SRMSQ9H3Y6 488 aa19.98■□□□□ 0.79
VPS53-210ENST00000571456 SPATA7Q9P0W8 599 aa19.98■□□□□ 0.79
VPS53-210ENST00000571456 ENTPD2Q9Y5L3 495 aa19.98■□□□□ 0.79
VPS53-210ENST00000571456 A0A1W2PQM1 296 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 PABPN1LA6NDY0 278 aaKnown RBP19.97■□□□□ 0.79
VPS53-210ENST00000571456 POC1B-GALNT4F8VUJ3 575 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 ENO2P09104 434 aaPredicted RBP19.97■□□□□ 0.79
VPS53-210ENST00000571456 CYP2A7P20853 494 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 SERPINB8P50452 374 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 RAB28P51157 221 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 ARHGAP19Q14CB8 494 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 DUS1LQ6P1R4 473 aaKnown RBP19.97■□□□□ 0.79
VPS53-210ENST00000571456 TMEM71Q6P5X7 295 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 ADGRD1Q6QNK2 874 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 CYHR1Q6ZMK1 362 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 AMIGO1Q86WK6 493 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 RASGRP3Q8IV61 690 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 CFAP61Q8NHU2 1237 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 EEF1AKMT1Q8WVE0 214 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 KCNE4Q8WWG9 221 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 LINGO1Q96FE5 620 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 ZDHHC12Q96GR4 267 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 HGH1Q9BTY7 390 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 TRIM54Q9BYV2 358 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 TRIM4Q9C037 500 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 EPB41L4BQ9H329 900 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 RRAGDQ9NQL2 400 aaPredicted RBP19.97■□□□□ 0.79
VPS53-210ENST00000571456 LNPEPQ9UIQ6 1025 aa19.97■□□□□ 0.79
VPS53-210ENST00000571456 NOVA2Q9UNW9 492 aaKnown RBP19.97■□□□□ 0.79
VPS53-210ENST00000571456 IQANK1A0A1B0GTG1 560 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 CCDC151A5D8V7 595 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 FKBP9O95302 570 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 MT-CO3P00414 261 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 NUDT17P0C025 328 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 SAT1P21673 171 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 CCKBRP32239 447 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 PPM1FP49593 454 aaPredicted RBP19.96■□□□□ 0.79
VPS53-210ENST00000571456 ATP6V0D1P61421 351 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 EIF3IQ13347 325 aaKnown RBP19.96■□□□□ 0.79
VPS53-210ENST00000571456 AMZ1Q400G9 498 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 ARMC6Q6NXE6 501 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 TDRPQ86YL5 185 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 HMGCLL1Q8TB92 370 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 MCOLN3Q8TDD5 553 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 ISL2Q96A47 359 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 SLC22A18Q96BI1 424 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 TBC1D10AQ9BXI6 508 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 SLC12A9Q9BXP2 914 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 DERL2Q9GZP9 239 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 ZMYND15Q9H091 742 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 PDP2Q9P2J9 529 aa19.96■□□□□ 0.79
VPS53-210ENST00000571456 PSMC3IPQ9P2W1 217 aaPredicted RBP19.96■□□□□ 0.79
VPS53-210ENST00000571456 HEMK1Q9Y5R4 338 aaPredicted RBP19.96■□□□□ 0.79
VPS53-210ENST00000571456 MN1Q10571 1320 aaPredicted RBP19.96■□□□□ 0.79
VPS53-210ENST00000571456 A0A087X1B8 175 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 OR5K3A6NET4 321 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 MYO1CO00159 1063 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 RASGRF2O14827 1237 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 KLK10O43240 276 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 WISP3O95389 354 aaPredicted RBP19.95■□□□□ 0.78
VPS53-210ENST00000571456 TSPAN12O95859 305 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 SNRPAP09012 282 aaKnown RBP19.95■□□□□ 0.78
VPS53-210ENST00000571456 HIST1H2AGP0C0S8 130 aaPredicted RBP19.95■□□□□ 0.78
VPS53-210ENST00000571456 HIST1H2ADP20671 130 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 HSD17B3P37058 310 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 AP1S2P56377 157 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 MROH9Q5TGP6 573 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 RAPH1Q70E73 1250 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 PIWIL4Q7Z3Z4 852 aaKnown RBP19.95■□□□□ 0.78
VPS53-210ENST00000571456 ADAMTSL2Q86TH1 951 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 TBC1D1Q86TI0 1168 aaPredicted RBP19.95■□□□□ 0.78
VPS53-210ENST00000571456 CEP97Q8IW35 865 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 LSMEM2Q8N112 164 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 DCAKDQ8WVC6 231 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 CABS1Q96KC9 395 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 HIST1H2AHQ96KK5 128 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 UBXN10Q96LJ8 280 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 HIST1H2AJQ99878 128 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 H2AFJQ9BTM1 129 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 DPH1Q9BZG8 443 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 FAM117AQ9C073 453 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 STRADBQ9C0K7 418 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 SYNDIG1Q9H7V2 258 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 PARVBQ9HBI1 364 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 AKAP7Q9P0M2 348 aaPredicted RBP19.95■□□□□ 0.78
VPS53-210ENST00000571456 TLK1Q9UKI8 766 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 TDRKHQ9Y2W6 561 aaKnown RBP19.95■□□□□ 0.78
VPS53-210ENST00000571456 ACOT9Q9Y305 439 aa19.95■□□□□ 0.78
VPS53-210ENST00000571456 HGSO14964 777 aaPredicted RBP19.94■□□□□ 0.78
VPS53-210ENST00000571456 FAM155BO75949 473 aa19.94■□□□□ 0.78
VPS53-210ENST00000571456 C9P02748 559 aa19.94■□□□□ 0.78
VPS53-210ENST00000571456 TYK2P29597 1187 aa19.94■□□□□ 0.78
VPS53-210ENST00000571456 PRKG2Q13237 762 aa19.94■□□□□ 0.78
VPS53-210ENST00000571456 UBAP2Q5T6F2 1119 aaKnown RBP19.94■□□□□ 0.78
VPS53-210ENST00000571456 ANKS6Q68DC2 871 aa19.94■□□□□ 0.78
VPS53-210ENST00000571456 UBE2R2Q712K3 238 aaPredicted RBP19.94■□□□□ 0.78
VPS53-210ENST00000571456 ZNF761Q86XN6 746 aaPredicted RBP19.94■□□□□ 0.78
VPS53-210ENST00000571456 RIBC1Q8N443 379 aaPredicted RBP19.94■□□□□ 0.78
VPS53-210ENST00000571456 OR9A1PQ8NGU1 263 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms