RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ALDH18A1P54886 795 aaKnown RBP6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 CDKL1Q00532 357 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 NFKB2Q00653 900 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 BNC1Q01954 994 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 PRKAA1Q13131 559 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 PRKG2Q13237 762 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 PCLAFQ15004 111 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 NR0B2Q15466 257 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 PHKG1Q16816 387 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 PPP1R3AQ16821 1122 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 PFKFB4Q16877 469 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 C14orf28Q4W4Y0 310 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 CDKL4Q5MAI5 379 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 LIPMQ5VYY2 423 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 ATG16L1Q676U5 607 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 ANKS6Q68DC2 871 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 SULT1C3Q6IMI6 304 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 CAPRIN2Q6IMN6 1127 aaKnown RBP6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 TCEAL6Q6IPX3 200 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 ARMC6Q6NXE6 501 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 KLHL35Q6PF15 583 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 SBSNQ6UWP8 590 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 ABRAXAS1Q6UWZ7 409 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 SH2D5Q6ZV89 423 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 ISCA2Q86U28 154 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 NRROSQ86YC3 692 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 GATAD2AQ86YP4 633 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 NUDCD3Q8IVD9 361 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 HOMEZQ8IX15 550 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCNYL1Q8N7R7 359 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 KYQ8NBH2 561 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 PDPRQ8NCN5 879 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 FBXO15Q8NCQ5 510 aaPredicted RBP6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 OR52E1Q8NGJ3 308 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 OR9A1PQ8NGU1 263 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 LRRC8CQ8TDW0 803 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 RHBDD1Q8TEB9 315 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC37A2Q8TED4 501 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 LCN9Q8WX39 176 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 TCEAL3Q969E4 200 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 COL26A1Q96A83 441 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 FBXL8Q96CD0 374 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 PHF21BQ96EK2 531 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCDC138Q96M89 665 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 ATOH8Q96SQ7 321 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 TSPAN10Q9H1Z9 355 aaPredicted RBP6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 SRMSQ9H3Y6 488 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 KIR3DX1Q9H7L2 352 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCDC177Q9NQR7 707 aaPredicted RBP6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 ABCF3Q9NUQ8 709 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 UCKL1Q9NWZ5 548 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 CPNE7Q9UBL6 633 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 OPTCQ9UBM4 332 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 GULP1Q9UBP9 304 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 CIDEBQ9UHD4 219 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 EMCNQ9ULC0 261 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 PLAGL1Q9UM63 463 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 PDE10AQ9Y233 779 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 STK38LQ9Y2H1 464 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 WDR37Q9Y2I8 494 aa6.4□□□□□ -1.38
CTDNEP1-204ENST00000570484 TRBV23OR9-2A0A075B6M9 112 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 GSAPA4D1B5 854 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 WDR91A4D1P6 747 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 FAM221BA6H8Z2 402 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 A6NCN8 305 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 PRR19A6NJB7 356 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 GFYI3L273 518 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 MYO1CO00159 1063 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 POLR3GO15318 223 aaPredicted RBP6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 FLRT2O43155 660 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 PCDHGA12O60330 932 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 TRIM13O60858 407 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 LRP3O75074 770 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 KATNA1O75449 491 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 CRCPO75575 148 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 WDR47O94967 919 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 CCNDBP1O95273 360 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 HSPA4LO95757 839 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC16A8O95907 504 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 SERPINE1P05121 402 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 BPGMP07738 259 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZNF806P0C7X5 589 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 XRCC1P18887 633 aaPredicted RBP6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 GRK2P25098 689 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 EEF1DP29692 281 aaKnown RBP6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 ALDH3A1P30838 453 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 GRK6P43250 576 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 RAB28P51157 221 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 PNLIPRP1P54315 467 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 MAZP56270 477 aaKnown RBP6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 NAA20P61599 178 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 TBPL1P62380 186 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 HERVK_113P63132 956 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 DAB2P98082 770 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 SPEM2Q0P670 501 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 GPR18Q14330 331 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 ARHGAP19Q14CB8 494 aa6.39□□□□□ -1.39
CTDNEP1-204ENST00000570484 CLCA4Q14CN2 919 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms