RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 DUX1O43812 170 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 SLC16A8O95907 504 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 CEACAM1P13688 526 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 AMD1P17707 334 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 PNLIPRP1P54315 467 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 ALDH18A1P54886 795 aaKnown RBP22.74■■□□□ 1.23
RAB40C-212ENST00000569575 MAGOHP61326 146 aaKnown RBP22.74■■□□□ 1.23
RAB40C-212ENST00000569575 NFKB2Q00653 900 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 KIR2DS3Q14952 304 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 NAA25Q14CX7 972 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 WDR74Q6RFH5 385 aaPredicted RBP22.74■■□□□ 1.23
RAB40C-212ENST00000569575 SPRED1Q7Z699 444 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 SFTPA2Q8IWL1 248 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 KLHDC8AQ8IYD2 350 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 TMEM151AQ8N4L1 468 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 IFI44Q8TCB0 444 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 CCDC74AQ96AQ1 378 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 AHCYL2Q96HN2 611 aaKnown RBP22.74■■□□□ 1.23
RAB40C-212ENST00000569575 EGFL8Q99944 293 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 STOX2Q9P2F5 926 aaPredicted RBP22.74■■□□□ 1.23
RAB40C-212ENST00000569575 IKZF3Q9UKT9 509 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 ICKQ9UPZ9 632 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 GVINP1Q7Z2Y8 2422 aa22.74■■□□□ 1.23
RAB40C-212ENST00000569575 PCNX2A6NKB5 2137 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 IGHV1OR21-1A0A087WYE8 117 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 STX16-NPEPL1H3BU86 382 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 STX16O14662 325 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 PLIN3O60664 434 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 ASPHQ12797 758 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 TRIP6Q15654 476 aaKnown RBP22.73■■□□□ 1.23
RAB40C-212ENST00000569575 ARMC6Q6NXE6 501 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 GUSBP11Q6P575 273 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 AGTRAPQ6RW13 159 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 PLXDC1Q8IUK5 500 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 SYTL1Q8IYJ3 562 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 OR4E2Q8NGC2 313 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 ZNF480Q8WV37 535 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 RHBDF1Q96CC6 855 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 CD180Q99467 661 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 CAPS2Q9BXY5 557 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 ZNF358Q9NW07 568 aa22.73■■□□□ 1.23
RAB40C-212ENST00000569575 PTBP2Q9UKA9 531 aaKnown RBP22.73■■□□□ 1.23
RAB40C-212ENST00000569575 CDV3Q9UKY7 258 aaKnown RBP22.73■■□□□ 1.23
RAB40C-212ENST00000569575 ANKRD12Q6UB98 2062 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 OR5K3A6NET4 321 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 C2orf74A8MZ97 194 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 SUPT3HB4E1H0 165 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 E7ENX8 843 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 SUPT3HO75486 399 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 PROCP04070 461 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 PROS1P07225 676 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 MTHFD2P13995 350 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 ATP5F1P24539 256 aaPredicted RBP22.72■■□□□ 1.23
RAB40C-212ENST00000569575 IMPA1P29218 277 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 ALDH4A1P30038 563 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 CAPZBP47756 277 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 KCNC1P48547 511 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 ACADVLP49748 655 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 PRKAA2P54646 552 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 TAP2Q03519 686 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 CAPN13Q6MZZ7 669 aaPredicted RBP22.72■■□□□ 1.23
RAB40C-212ENST00000569575 CDHR3Q6ZTQ4 885 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 RAB44Q7Z6P3 723 aaPredicted RBP22.72■■□□□ 1.23
RAB40C-212ENST00000569575 FBXO39Q8N4B4 442 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 OR56A3Q8NH54 315 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 TCP10LQ8TDR4 215 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 DENND1AQ8TEH3 1009 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 UBTD2Q8WUN7 234 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 SREK1Q8WXA9 508 aaKnown RBP22.72■■□□□ 1.23
RAB40C-212ENST00000569575 ARL8AQ96BM9 186 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 FAM122AQ96E09 287 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 ZDHHC12Q96GR4 267 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 MIPEPQ99797 713 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 CCDC3Q9BQI4 270 aa22.72■■□□□ 1.23
RAB40C-212ENST00000569575 UTP6Q9NYH9 597 aaKnown RBP22.72■■□□□ 1.23
RAB40C-212ENST00000569575 PIPSLA2A3N6 862 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 FOXO6A8MYZ6 492 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 TOX3O15405 576 aaPredicted RBP22.71■■□□□ 1.23
RAB40C-212ENST00000569575 B4GAT1O43505 415 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 CCNDBP1O95273 360 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 GUCA1CO95843 209 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 GFAPP14136 432 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 PIK3CGP48736 1102 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 CCSMST1Q4G0I0 132 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 HOMEZQ8IX15 550 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 ADGRF3Q8IZF5 1079 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 RTKNQ9BST9 563 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 HAUS8Q9BT25 410 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 UNKQ9C0B0 810 aaKnown RBP22.71■■□□□ 1.23
RAB40C-212ENST00000569575 CCDC177Q9NQR7 707 aaPredicted RBP22.71■■□□□ 1.23
RAB40C-212ENST00000569575 HRASLS2Q9NWW9 162 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 PCDHB11Q9Y5F2 797 aa22.71■■□□□ 1.23
RAB40C-212ENST00000569575 PRAMEF33A0A0G2JMD5 474 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 TK2O00142 265 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 CPNE6O95741 557 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 CHRM5P08912 532 aaPredicted RBP22.7■■□□□ 1.22
RAB40C-212ENST00000569575 MYL2P10916 166 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 CPA3P15088 417 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 HRH2P25021 359 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 OAS2P29728 719 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms