RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 IVDP26440 423 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 NFATC3Q12968 1075 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 CTBP1Q13363 440 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 SYDE1Q6ZW31 735 aaPredicted RBP19.56■□□□□ 0.72
CLK3-225ENST00000569063 DENND6AQ8IWF6 608 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 GPR135Q8IZ08 494 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 DNAJC22Q8N4W6 341 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 ZBTB2Q8N680 514 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 HMGCLL1Q8TB92 370 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 CALML6Q8TD86 181 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 N4BP2L2Q92802 583 aaPredicted RBP19.56■□□□□ 0.72
CLK3-225ENST00000569063 FAM136AQ96C01 138 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 CAPZA3Q96KX2 299 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 RUNDC3BQ96NL0 473 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 IL17FQ96PD4 163 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 NAPGQ99747 312 aaPredicted RBP19.56■□□□□ 0.72
CLK3-225ENST00000569063 DPH2Q9BQC3 489 aaPredicted RBP19.56■□□□□ 0.72
CLK3-225ENST00000569063 SLC25A18Q9H1K4 315 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 CHST8Q9H2A9 424 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 C20orf96Q9NUD7 363 aaPredicted RBP19.56■□□□□ 0.72
CLK3-225ENST00000569063 KLHL42Q9P2K6 505 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 CIDEBQ9UHD4 219 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 FARSAQ9Y285 508 aaKnown RBP19.56■□□□□ 0.72
CLK3-225ENST00000569063 KCNMB2Q9Y691 235 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 AP1M2Q9Y6Q5 423 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 E5RI56 91 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 ZNF749O43361 778 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 PRICKLE3O43900 615 aaPredicted RBP19.55■□□□□ 0.72
CLK3-225ENST00000569063 OR2B3O76000 313 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 RAB40ALP0C0E4 278 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 PLA2G2AP14555 144 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 PGAM1P18669 254 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 SLC1A2P43004 574 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 CLCN7P51798 805 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 CCSMST1Q4G0I0 132 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 ACSBG2Q5FVE4 666 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 LCN10Q6JVE6 187 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 CNSTQ6PJW8 725 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 SYVN1Q86TM6 617 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 RAB42Q8N4Z0 105 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 C2orf73Q8N5S3 287 aaPredicted RBP19.55■□□□□ 0.72
CLK3-225ENST00000569063 LMNTD1Q8N9Z9 388 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.55■□□□□ 0.72
CLK3-225ENST00000569063 RUVBL2Q9Y230 463 aaKnown RBP19.55■□□□□ 0.72
CLK3-225ENST00000569063 POLHQ9Y253 713 aa19.55■□□□□ 0.72
CLK3-225ENST00000569063 FKBP9O95302 570 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 MAGP20916 626 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 BDKRB1P46663 353 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 UGT8Q16880 541 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 DEFB110Q30KQ9 67 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 ZNF549Q6P9A3 640 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 FAM20CQ8IXL6 584 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 KLHL7Q8IXQ5 586 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 SYTL1Q8IYJ3 562 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 KCNJ9Q92806 393 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 EBNA1BP2Q99848 306 aaKnown RBP19.54■□□□□ 0.72
CLK3-225ENST00000569063 FAM167BQ9BTA0 163 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 NAT9Q9BTE0 207 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 NLNQ9BYT8 704 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 SLC7A5P2Q9GIP4 190 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 FBXO6Q9NRD1 293 aaPredicted RBP19.54■□□□□ 0.72
CLK3-225ENST00000569063 INTS7Q9NVH2 962 aaKnown RBP19.54■□□□□ 0.72
CLK3-225ENST00000569063 FBXO5Q9UKT4 447 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 PLCL2Q9UPR0 1127 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 MED16Q9Y2X0 877 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 COMMD10Q9Y6G5 202 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 CFAP46Q8IYW2 2715 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 BOD1L1Q8NFC6 3051 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 PIEZO2Q9H5I5 2752 aa19.54■□□□□ 0.72
CLK3-225ENST00000569063 CDC14CA4D256 554 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 CCDC188H7C350 402 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 PSIP1O75475 530 aaKnown RBP19.53■□□□□ 0.72
CLK3-225ENST00000569063 TTC4O95801 387 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 CAPN1P07384 714 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 RPS18P62269 152 aaKnown RBP19.53■□□□□ 0.72
CLK3-225ENST00000569063 DR1Q01658 176 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 DHX9Q08211 1270 aaKnown RBP19.53■□□□□ 0.72
CLK3-225ENST00000569063 CRYMQ14894 314 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 SF1Q15637 639 aaKnown RBP19.53■□□□□ 0.72
CLK3-225ENST00000569063 KLHL38Q2WGJ6 581 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 MSS51Q4VC12 460 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 HSP90AA5PQ58FG0 334 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 ZNF385CQ66K41 422 aaPredicted RBP19.53■□□□□ 0.72
CLK3-225ENST00000569063 RHBDD2Q6NTF9 364 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 TLDC1Q6P9B6 456 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 NEK10Q6ZWH5 1172 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 KCNMB4Q86W47 210 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 DENND1AQ8TEH3 1009 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 SPRTNQ9H040 489 aaPredicted RBP19.53■□□□□ 0.72
CLK3-225ENST00000569063 CCDC68Q9H2F9 335 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 SPATA7Q9P0W8 599 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.53■□□□□ 0.72
CLK3-225ENST00000569063 RNF14Q9UBS8 474 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 COL6A6A6NMZ7 2263 aa19.53■□□□□ 0.72
CLK3-225ENST00000569063 TARM1B6A8C7 271 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 SMAPO00193 183 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 ZSCAN9O15535 394 aaPredicted RBP19.52■□□□□ 0.72
CLK3-225ENST00000569063 HAUS5O94927 633 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 F7P08709 466 aaPredicted RBP19.52■□□□□ 0.72
CLK3-225ENST00000569063 AGXTP21549 392 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms