RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TCEAL5Q5H9L2 206 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 C12orf60Q5U649 245 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 KIAA0930Q6ICG6 404 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 TMEM154Q6P9G4 183 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 CTR9Q6PD62 1173 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 SPSB3Q6PJ21 355 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 CLEC17AQ6ZS10 378 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 MTSS1LQ765P7 747 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 ASCL5Q7RTU5 278 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 PIWIL3Q7Z3Z3 882 aaKnown RBP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 AACSQ86V21 672 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 NR2C2APQ86WQ0 139 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 DNAAF5Q86Y56 855 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 FOXRED2Q8IWF2 684 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 ARHGAP12Q8IWW6 846 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 FAM133AQ8N9E0 248 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 MOSPD2Q8NHP6 518 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 SPATA22Q8NHS9 363 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 POMGNT1Q8WZA1 660 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 RND1Q92730 232 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 PABPC5Q96DU9 382 aaKnown RBP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 SIPA1Q96FS4 1042 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 FER1L6-AS2Q96M78 137 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 SLITRK1Q96PX8 696 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 PKP4Q99569 1192 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 TEX13BQ9BXU2 312 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 FAM129AQ9BZQ8 928 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 PLEKHA4Q9H4M7 779 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 SH2D4AQ9H788 454 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 MAGEE1Q9HCI5 957 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 DNAJB9Q9UBS3 223 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 MALT1Q9UDY8 824 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 RALYQ9UKM9 306 aaKnown RBP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 INTS6Q9UL03 887 aaKnown RBP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 PADI1Q9ULC6 663 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 TMCC3Q9ULS5 477 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 EXOC6BQ9Y2D4 811 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 SNX9Q9Y5X1 595 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 MUC6Q6W4X9 2439 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 SCN10AQ9Y5Y9 1956 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 ROBO3Q96MS0 1386 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 MYO10Q9HD67 2058 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 hCG_1809904A0A1W2PP81 198 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 A0A1W2PPE2 198 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 A0A1W2PR64 198 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 TMEM221A6NGB7 291 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 M0R296 226 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 SOCS6O14544 535 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 SLC16A5O15375 505 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 IPO8O15397 1037 aaKnown RBP3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 MBTPS2O43462 519 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 SEC31AO94979 1220 aaKnown RBP3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 CLDN14O95500 239 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 MT-CYBP00156 380 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 TFP02787 698 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 RB1P06400 928 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 MMP2P08253 660 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 CYC1P08574 325 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 THEGLP0DJG4 465 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 MYBL1P10243 752 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 SAT1P21673 171 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 CALML3P27482 149 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 CHATP28329 748 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 GP5P40197 560 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 EIF2S3P41091 472 aaKnown RBP3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 ZNF131P52739 623 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 GOLGA8DPQ0D2H9 430 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 BAATQ14032 418 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 FRG1Q14331 258 aaKnown RBP3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 NFE2L1Q14494 772 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 SMC1AQ14683 1233 aaKnown RBP3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 EPC2Q52LR7 807 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 KRTCAP3Q53RY4 240 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 FAM76BQ5HYJ3 339 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 C9orf152Q5JTZ5 239 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 CAVIN1Q6NZI2 390 aaKnown RBP3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 ALKBH5Q6P6C2 394 aaKnown RBP3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 SARM1Q6SZW1 724 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 SUSD1Q6UWL2 747 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 LCTLQ6UWM7 567 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 RAPH1Q70E73 1250 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 BTN2A1Q7KYR7 527 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 RRM2BQ7LG56 351 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 CCDC186Q7Z3E2 898 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 SLC46A3Q7Z3Q1 461 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 RPAINQ86UA6 219 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 KBTBD6Q86V97 674 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 MYOCDQ8IZQ8 938 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 ZCCHC9Q8N567 271 aaKnown RBP3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 SPATA20Q8TB22 786 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 PHOSPHO2Q8TCD6 241 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 NEK9Q8TD19 979 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 DUSP19Q8WTR2 217 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 DEPDC1BQ8WUY9 529 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 SECISBP2LQ93073 1101 aaKnown RBP3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 SMARCE1Q969G3 411 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 CCDC47Q96A33 483 aaKnown RBP3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 FAM149B1Q96BN6 582 aa3.28□□□□□ -1.88
HMGB1P6-201ENST00000569046 FBXL8Q96CD0 374 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms