RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SOX11P35716 441 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 PBX1P40424 430 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 ARHGAP25P42331 645 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 GEMP55040 296 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 RBPJQ06330 500 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 TYRO3Q06418 890 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 TFDP2Q14188 446 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 GRM7Q14831 915 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 TAZQ16635 292 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 RANBP10Q6VN20 620 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 KBTBD2Q8IY47 623 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 CCDC110Q8TBZ0 833 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 IQCDQ96DY2 449 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 POM121Q96HA1 1249 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 FICDQ9BVA6 458 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 FAM96AQ9H5X1 160 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 CUTCQ9NTM9 273 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 DDX56Q9NY93 547 aaKnown RBP11.95□□□□□ -0.5
SNX29-207ENST00000568949 SAE1Q9UBE0 346 aaPredicted RBP11.95□□□□□ -0.5
SNX29-207ENST00000568949 CTSFQ9UBX1 484 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 SEC14L3Q9UDX4 400 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 RSPH14Q9UHP6 348 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 CAPN11Q9UMQ6 739 aa11.95□□□□□ -0.5
SNX29-207ENST00000568949 TACC2O95359 2948 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 TRBV5-4A0A0C4DH59 114 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 MAP2K7O14733 419 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 LIN7AO14910 233 aaPredicted RBP11.94□□□□□ -0.5
SNX29-207ENST00000568949 PRICKLE3O43900 615 aaPredicted RBP11.94□□□□□ -0.5
SNX29-207ENST00000568949 CST8O60676 142 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 AP2A1O95782 977 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 ACPPP15309 386 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 PECAM1P16284 738 aaPredicted RBP11.94□□□□□ -0.5
SNX29-207ENST00000568949 ACRV1P26436 265 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 MST1P26927 711 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 PEBP1P30086 187 aaKnown RBP11.94□□□□□ -0.5
SNX29-207ENST00000568949 CDKN2BP42772 138 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 ZNF140P52738 457 aaPredicted RBP11.94□□□□□ -0.5
SNX29-207ENST00000568949 SMSP52788 366 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 CASP6P55212 293 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 MSLNQ13421 630 aaPredicted RBP11.94□□□□□ -0.5
SNX29-207ENST00000568949 TCTE1Q5JU00 501 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 MFSD7Q6UXD7 560 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 SHISA6Q6ZSJ9 500 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 CDH24Q86UP0 819 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 FAM20CQ8IXL6 584 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 OR13C4Q8NGS5 318 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 OR5K2Q8NHB8 316 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.94□□□□□ -0.5
SNX29-207ENST00000568949 PSMF1Q92530 271 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 P3H4Q92791 437 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 CRB3Q9BUF7 120 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 PACSIN1Q9BY11 444 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 ZNF160Q9HCG1 818 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 LUC7LQ9NQ29 371 aaKnown RBP11.94□□□□□ -0.5
SNX29-207ENST00000568949 PLA2G3Q9NZ20 509 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 TDRKHQ9Y2W6 561 aaKnown RBP11.94□□□□□ -0.5
SNX29-207ENST00000568949 DCHS2Q6V1P9 2916 aa11.94□□□□□ -0.5
SNX29-207ENST00000568949 HACD1B0YJ81 288 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 AP2A2O94973 939 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 RASAL1O95294 804 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 SERPINC1P01008 464 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 TMEM253P0C7T8 217 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 MYBL2P10244 700 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 MAGP20916 626 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 ADRA1AP35348 466 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 CDKN1CP49918 316 aaPredicted RBP11.93□□□□□ -0.5
SNX29-207ENST00000568949 KRTAP10-9P60411 292 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 ADORA2A-AS1P86434 159 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 FAM214AQ32MH5 1076 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 ZC3H12BQ5HYM0 836 aaKnown RBP11.93□□□□□ -0.5
SNX29-207ENST00000568949 ATG9BQ674R7 924 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 NLRP9Q7RTR0 991 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 SERPINA9Q86WD7 417 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 CLDN19Q8N6F1 224 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 TTC29Q8NA56 475 aaPredicted RBP11.93□□□□□ -0.5
SNX29-207ENST00000568949 SLC35G2Q8TBE7 412 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 SLC22A18Q96BI1 424 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 MTFMTQ96DP5 389 aaKnown RBP11.93□□□□□ -0.5
SNX29-207ENST00000568949 ZNF285Q96NJ3 590 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 QKIQ96PU8 341 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNX29-207ENST00000568949 RNF32Q9H0A6 362 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 GBA3Q9H227 469 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 PTGFRNQ9P2B2 879 aa11.93□□□□□ -0.5
SNX29-207ENST00000568949 LUC7L2Q9Y383 392 aaKnown RBP11.93□□□□□ -0.5
SNX29-207ENST00000568949 MRPS2Q9Y399 296 aaKnown RBP11.93□□□□□ -0.5
SNX29-207ENST00000568949 CPAMD8Q8IZJ3 1885 aa11.92□□□□□ -0.5
SNX29-207ENST00000568949 NSG1A0A0A6YYJ2 146 aa11.92□□□□□ -0.5
SNX29-207ENST00000568949 A0A1W2PQ72 361 aa11.92□□□□□ -0.5
SNX29-207ENST00000568949 FITM1A5D6W6 292 aa11.92□□□□□ -0.5
SNX29-207ENST00000568949 H7C0S8 307 aa11.92□□□□□ -0.5
SNX29-207ENST00000568949 QSOX1O00391 747 aa11.92□□□□□ -0.5
SNX29-207ENST00000568949 BMP10O95393 424 aa11.92□□□□□ -0.5
SNX29-207ENST00000568949 SERPINA7P05543 415 aa11.92□□□□□ -0.5
SNX29-207ENST00000568949 PRR35P0CG20 571 aa11.92□□□□□ -0.5
SNX29-207ENST00000568949 MC4RP32245 332 aa11.92□□□□□ -0.5
SNX29-207ENST00000568949 NSG1P42857 185 aa11.92□□□□□ -0.5
SNX29-207ENST00000568949 SLC1A1P43005 524 aa11.92□□□□□ -0.5
SNX29-207ENST00000568949 OR1D4P47884 311 aa11.92□□□□□ -0.5
SNX29-207ENST00000568949 PLOD1Q02809 727 aaPredicted RBP11.92□□□□□ -0.5
SNX29-207ENST00000568949 OCA2Q04671 838 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms