RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 C3orf18Q9UK00 162 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 ASF1AQ9Y294 204 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 ARL5AQ9Y689 179 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 CACNA1CQ13936 2221 aa15.48■□□□□ 0.07
CLK3-223ENST00000568488 FAM221AA4D161 298 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 VSTM2BA6NLU5 285 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 BMP10O95393 424 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 CYP1A2P05177 515 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 SERPINA7P05543 415 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 CELA2AP08217 269 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 NFKB1P19838 968 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 KLK2P20151 261 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 MAGP20916 626 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 FDXRP22570 491 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 PTPN3P26045 913 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 CD68P34810 354 aaPredicted RBP15.47■□□□□ 0.07
CLK3-223ENST00000568488 GRIA3P42263 894 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 RAB28P51157 221 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 IST1P53990 364 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 OCA2Q04671 838 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 GRM7Q14831 915 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 ATG9BQ674R7 924 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 HIBCHQ6NVY1 386 aaPredicted RBP15.47■□□□□ 0.07
CLK3-223ENST00000568488 CNSTQ6PJW8 725 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 NLRP9Q7RTR0 991 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 TMEM200AQ86VY9 491 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 TGIF2LYQ8IUE0 185 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 DTWD1Q8N5C7 304 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 TTC29Q8NA56 475 aaPredicted RBP15.47■□□□□ 0.07
CLK3-223ENST00000568488 CHDHQ8NE62 594 aaPredicted RBP15.47■□□□□ 0.07
CLK3-223ENST00000568488 STT3BQ8TCJ2 826 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 MIEF2Q96C03 454 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 SDCCAG3Q96C92 435 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 TMEM121Q9BTD3 319 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 TSPAN10Q9H1Z9 355 aaPredicted RBP15.47■□□□□ 0.07
CLK3-223ENST00000568488 OR6C2Q9NZP2 312 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 PLAGL1Q9UM63 463 aa15.47■□□□□ 0.07
CLK3-223ENST00000568488 LRRD1A4D1F6 860 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 OR5H15A6NDH6 313 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 C2orf81A6NN90 581 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 CXCR2P25025 360 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 DNAJA1P31689 397 aaKnown RBP15.46■□□□□ 0.07
CLK3-223ENST00000568488 DYNLT1P63172 113 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 EEF1A2Q05639 463 aaKnown RBP15.46■□□□□ 0.07
CLK3-223ENST00000568488 RPA4Q13156 261 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 ABHD17BQ5VST6 288 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 YOD1Q5VVQ6 348 aaPredicted RBP15.46■□□□□ 0.07
CLK3-223ENST00000568488 ARHGEF18Q6ZSZ5 1173 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 APTXQ7Z2E3 356 aaKnown RBP15.46■□□□□ 0.07
CLK3-223ENST00000568488 DNAAF3Q8N9W5 541 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 NRGNQ92686 78 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 ULK4Q96C45 1275 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 OLFM3Q96PB7 478 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 VPS37BQ9H9H4 285 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 STMN3Q9NZ72 180 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 IL1RAPL1Q9NZN1 696 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.46■□□□□ 0.07
CLK3-223ENST00000568488 ZNF835Q9Y2P0 537 aa15.46■□□□□ 0.07
CLK3-223ENST00000568488 PRRC2AP48634 2157 aaKnown RBP15.45■□□□□ 0.06
CLK3-223ENST00000568488 ZNHIT1O43257 154 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 PROSCO94903 275 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 ZGLP1P0C6A0 271 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 TPBGLP0DKB5 382 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 COX6A1P12074 109 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 PEBP1P30086 187 aaKnown RBP15.45■□□□□ 0.06
CLK3-223ENST00000568488 MYL5Q02045 173 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 KIR2DS3Q14952 304 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 BRD3Q15059 726 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 LONRF1Q17RB8 773 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 ZNF766Q5HY98 468 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 SLC9A4Q6AI14 798 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 C3P1Q6ZMU1 363 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 Q6ZPB1 254 aaPredicted RBP15.45■□□□□ 0.06
CLK3-223ENST00000568488 RFX6Q8HWS3 928 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 ACBD4Q8NC06 268 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 HEXDCQ8WVB3 486 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 OXNAD1Q96HP4 312 aaPredicted RBP15.45■□□□□ 0.06
CLK3-223ENST00000568488 GPR137Q96N19 417 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 ZNF304Q9HCX3 659 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 KLHL8Q9P2G9 620 aaPredicted RBP15.45■□□□□ 0.06
CLK3-223ENST00000568488 TNFRSF10DQ9UBN6 386 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 POLG2Q9UHN1 485 aa15.45■□□□□ 0.06
CLK3-223ENST00000568488 TMEM200CA6NKL6 621 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 NPIPA5E9PKD4 350 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 MLYCDO95822 493 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 ITGAMP11215 1152 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 ABOP16442 354 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 EMP2P54851 167 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 XIAPP98170 497 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 ALDH6A1Q02252 535 aaKnown RBP15.44■□□□□ 0.06
CLK3-223ENST00000568488 CACNG1Q06432 222 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 ZNF33BQ06732 778 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 NFKBIBQ15653 356 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 FAM214AQ32MH5 1076 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 KRTCAP3Q53RY4 240 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 TCTE1Q5JU00 501 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 PID1Q7Z2X4 250 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 LAPTM4BQ86VI4 370 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 TBC1D21Q8IYX1 336 aa15.44■□□□□ 0.06
CLK3-223ENST00000568488 C2orf73Q8N5S3 287 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms