RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 NRTNQ99748 197 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 C17orf62Q9BQA9 187 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 MENTQ9BUN1 341 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 RAB11FIP5Q9BXF6 653 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 NLNQ9BYT8 704 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 KLHL25Q9H0H3 589 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 CHST8Q9H2A9 424 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 ACTR5Q9H9F9 607 aaPredicted RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 AKIRIN1Q9H9L7 192 aaPredicted RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 ASH1LQ9NR48 2969 aaKnown RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 PCMTD2Q9NV79 361 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 SPHK1Q9NYA1 384 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 SAMD15Q9P1V8 674 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 ANAPC2Q9UJX6 822 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 PLAGL1Q9UM63 463 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 FARSAQ9Y285 508 aaKnown RBP4.62□□□□□ -1.67
CLK3-219ENST00000567805 MAN2B2Q9Y2E5 1009 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 MRFAP1Q9Y605 127 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 AP1M2Q9Y6Q5 423 aa4.62□□□□□ -1.67
CLK3-219ENST00000567805 MDC1Q14676 2089 aaKnown RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 HEATR5BQ9P2D3 2071 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 TLN1Q9Y490 2541 aaKnown RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 GOLGA6L10A0A0M3HER8 536 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 FAM237BA0A1B0GVD1 139 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 MAGEB16A2A368 324 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 FAM187AA6NFU0 413 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 SDR42E2A6NKP2 422 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 C9J4A7 227 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 GOLGA8KD6RF30 607 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 H3BMH7 237 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 GOLGA8TH3BQL2 631 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 RASGRF2O14827 1237 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 ZSCAN9O15535 394 aaPredicted RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 ZSCAN12O43309 604 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 PHF2O75151 1096 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 AVILO75366 819 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 OR2B3O76000 313 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 TMEM63AO94886 807 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 FKBP9O95302 570 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 WISP1O95388 367 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 C1orf105O95561 183 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 S1PR4O95977 384 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 KRT14P02533 472 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 CAPN1P07384 714 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 CD63P08962 238 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 OGNP20774 298 aaKnown RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 CD9P21926 228 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 ATP5DP30049 168 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 PEBP1P30086 187 aaKnown RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 COILP38432 576 aaPredicted RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 CCNFP41002 786 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 CASRP41180 1078 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 GCGRP47871 477 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 GABRA4P48169 554 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 FNTAP49354 379 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 EIF3BP55884 814 aaKnown RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 PRR20EP86478 221 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 PRR20CP86479 221 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 PRR20DP86480 221 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 PRR20BP86481 221 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 PRR20AP86496 221 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 IL10RAQ13651 578 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 GRB7Q14451 532 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 GBX1Q14549 363 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 NCF4Q15080 339 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 ZIC1Q15915 447 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 DEFB110Q30KQ9 67 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 ANKRD20A4Q4UJ75 823 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 CTSL3PQ5NE16 218 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 PRAMEF17Q5VTA0 474 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 ANKRD22Q5VYY1 191 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 ZNF385CQ66K41 422 aaPredicted RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 LCN10Q6JVE6 187 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 RHBDD2Q6NTF9 364 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 TCTN3Q6NUS6 607 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 NEPROQ6NW34 567 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 TTC27Q6P3X3 843 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 CASC4Q6P4E1 433 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 TLDC1Q6P9B6 456 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 FAM198BQ6UWH4 519 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 CES3Q6UWW8 571 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 TMEM135Q86UB9 458 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 TRIM73Q86UV7 250 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 CAND1Q86VP6 1230 aaKnown RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 PTRH1Q86Y79 214 aaKnown RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 CILP2Q8IUL8 1156 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 REXO1L1PQ8IX06 675 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 SLC35F6Q8N357 371 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 DNAJC22Q8N4W6 341 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 ENDOVQ8N8Q3 282 aaKnown RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 LINC01555Q8NAE3 123 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 OR2L8Q8NGY9 312 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 CFAP61Q8NHU2 1237 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 HMGCLL1Q8TB92 370 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 PROKR1Q8TCW9 393 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 MAGEC3Q8TD91 643 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 ACTRT1Q8TDG2 376 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 DENND1AQ8TEH3 1009 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 SKA2Q8WVK7 121 aaPredicted RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 LPGAT1Q92604 370 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms