RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 EXOC3L4Q17RC7 722 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 CXorf66Q5JRM2 361 aaPredicted RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 RARS2Q5T160 578 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 C11orf63Q6NUN7 778 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 ALKBH5Q6P6C2 394 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 PLPPR4Q7Z2D5 763 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 IRF2BP2Q7Z5L9 587 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 SLC39A11Q8N1S5 342 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 MAB21L3Q8N8X9 362 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 KDM1BQ8NB78 822 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 LRRC15Q8TF66 581 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 MAIP1Q8WWC4 291 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 CLDN23Q96B33 292 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 RSRC1Q96IZ7 334 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 IFT74Q96LB3 600 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 GDAP1L1Q96MZ0 367 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 FMO2Q99518 471 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 WDR77Q9BQA1 342 aaPredicted RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 CWH43Q9H720 699 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 PRMT8Q9NR22 394 aaPredicted RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 SETD4Q9NVD3 440 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 PLK2Q9NYY3 685 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 DDX25Q9UHL0 483 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 ODF2LQ9ULJ1 636 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 RPL26L1Q9UNX3 145 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 INSL5Q9Y5Q6 135 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 KCNE2Q9Y6J6 123 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 R4GN57 208 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 BDP1A6H8Y1 2624 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 A0A087X0T9 212 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 KANSL1LA0AUZ9 987 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 GAGE10A6NGK3 116 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 E7ENQ6 273 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 ANHXE9PGG2 379 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 AP3D1O14617 1153 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 LDB2O43679 373 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 NMT2O60551 498 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 PROP1O75360 226 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 ATP5HO75947 161 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 AKAP3O75969 853 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 LUC7L3O95232 432 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 PAPSS2O95340 614 aaPredicted RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 FTCDO95954 541 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 FGF2P09038 288 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 FAM228BP0C875 321 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 GLULP15104 373 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 UCHL3P15374 230 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 HOXA6P31267 233 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 HOXA11P31270 313 aaPredicted RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 DCTDP32321 178 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 RYKP34925 604 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 CRYBB1P53674 252 aaPredicted RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 F2RL1P55085 397 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 HDAC4P56524 1084 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 SNRPFP62306 86 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 POU5F1Q01860 360 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 CAV1Q03135 178 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 ENPEPQ07075 957 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 ALCAMQ13740 583 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 VEPH1Q14D04 833 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 RNPS1Q15287 305 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 UAP1Q16222 522 aaPredicted RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 KNOP1Q1ED39 458 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 KRT71Q3SY84 523 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 TRMT10CQ7L0Y3 403 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 PIGWQ7Z7B1 504 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 HAPLN4Q86UW8 402 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 NT5DC3Q86UY8 548 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 TTC39CQ8N584 583 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 UBL4BQ8N7F7 174 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 FAM47BQ8NA70 645 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 GJC3Q8NFK1 279 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 FAM20AQ96MK3 541 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 FRG2BQ96QU4 278 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 FAM118BQ9BPY3 351 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 SRSF8Q9BRL6 282 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 ERP44Q9BS26 406 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 TMEM175Q9BSA9 504 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 GHITMQ9H3K2 345 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 PLEKHA4Q9H4M7 779 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 PAPOLBQ9NRJ5 636 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 OLFML3Q9NRN5 406 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 HOMER3Q9NSC5 361 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 SLC6A13Q9NSD5 602 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 PCYOX1Q9UHG3 505 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 FAM153AQ9UHL3 310 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 PADI3Q9ULW8 664 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 TFR2Q9UP52 801 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 GPR34Q9UPC5 381 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 WDR91A4D1P6 747 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 TIMM23O14925 209 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 MTA2O94776 668 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 PLA2G4BP0C869 781 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 CTPS1P17812 591 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 KELP23276 732 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 RFC1P35251 1148 aaPredicted RBP4.15□□□□□ -1.74
LINC00561-201ENST00000565815 CCR3P51677 355 aa4.15□□□□□ -1.74
LINC00561-201ENST00000565815 ELLP55199 621 aaPredicted RBP4.15□□□□□ -1.74
LINC00561-201ENST00000565815 HNF4GQ14541 408 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms