RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 PTPN3P26045 913 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 SOX11P35716 441 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 RAB28P51157 221 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 DYNLT1P63172 113 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 PMP22Q01453 160 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 KLC1Q07866 573 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 RPA4Q13156 261 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 GRM7Q14831 915 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 NFKBIBQ15653 356 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 SLC1A5Q15758 541 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 CNSTQ6PJW8 725 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 COX15Q7KZN9 410 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 NLRP9Q7RTR0 991 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 RFX6Q8HWS3 928 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 TTC29Q8NA56 475 aaPredicted RBP7.01□□□□□ -1.29
VPS4A-203ENST00000564399 OR4K2Q8NGD2 314 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 OR5AR1Q8NGP9 310 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 ADAMTS18Q8TE60 1221 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 PSMF1Q92530 271 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 MIEF2Q96C03 454 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 ULK4Q96C45 1275 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 MRGPRX2Q96LB1 330 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 COPS8Q99627 209 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 TMUB1Q9BVT8 246 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 FSD1LQ9BXM9 530 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 ENKD1Q9H0I2 346 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 FAM96AQ9H5X1 160 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 IL1RAPL1Q9NZN1 696 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 OR6C2Q9NZP2 312 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.01□□□□□ -1.29
VPS4A-203ENST00000564399 CTTNBP2NLQ9P2B4 639 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 C3orf18Q9UK00 162 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 ASF1AQ9Y294 204 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 ARL5AQ9Y689 179 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 MAU2Q9Y6X3 613 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 HCFC1P51610 2035 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 VSTM2BA6NLU5 285 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 KDM1AO60341 852 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 PRAMEF2O60811 474 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 FAM155BO75949 473 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 WISP2O76076 250 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 BMP10O95393 424 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 MLYCDO95822 493 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 ONECUT2O95948 504 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 SERPINA7P05543 415 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 ZFXP17010 805 aaPredicted RBP7□□□□□ -1.29
VPS4A-203ENST00000564399 ITGALP20701 1170 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 FDXRP22570 491 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 CD68P34810 354 aaPredicted RBP7□□□□□ -1.29
VPS4A-203ENST00000564399 GRIA3P42263 894 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 PPP2R2AP63151 447 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 EEF1A2Q05639 463 aaKnown RBP7□□□□□ -1.29
VPS4A-203ENST00000564399 KIR2DS3Q14952 304 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 BRD3Q15059 726 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 LONRF1Q17RB8 773 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 FAM214AQ32MH5 1076 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 ODF2Q5BJF6 829 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 ZC3H12BQ5HYM0 836 aaKnown RBP7□□□□□ -1.29
VPS4A-203ENST00000564399 TCTE1Q5JU00 501 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 ABHD17BQ5VST6 288 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 YOD1Q5VVQ6 348 aaPredicted RBP7□□□□□ -1.29
VPS4A-203ENST00000564399 SLC9A4Q6AI14 798 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 HIBCHQ6NVY1 386 aaPredicted RBP7□□□□□ -1.29
VPS4A-203ENST00000564399 ARHGEF18Q6ZSZ5 1173 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 NCCRP1Q6ZVX7 275 aaPredicted RBP7□□□□□ -1.29
VPS4A-203ENST00000564399 NDUFAF7Q7L592 441 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 APTXQ7Z2E3 356 aaKnown RBP7□□□□□ -1.29
VPS4A-203ENST00000564399 PID1Q7Z2X4 250 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 TMEM200AQ86VY9 491 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 SPPL2CQ8IUH8 684 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 CHDHQ8NE62 594 aaPredicted RBP7□□□□□ -1.29
VPS4A-203ENST00000564399 FLVCR1-AS1Q8TAF5 88 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 STT3BQ8TCJ2 826 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 CA5BP1Q8WTZ4 195 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 HEXDCQ8WVB3 486 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 SDCCAG3Q96C92 435 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 OLFM3Q96PB7 478 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 SELENOSQ9BQE4 189 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 TSPAN10Q9H1Z9 355 aaPredicted RBP7□□□□□ -1.29
VPS4A-203ENST00000564399 ZNF304Q9HCX3 659 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 STMN3Q9NZ72 180 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 CHMP5Q9NZZ3 219 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 KLHL8Q9P2G9 620 aaPredicted RBP7□□□□□ -1.29
VPS4A-203ENST00000564399 ZNF282Q9UDV7 671 aaPredicted RBP7□□□□□ -1.29
VPS4A-203ENST00000564399 POLG2Q9UHN1 485 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 PLAGL1Q9UM63 463 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 MEMO1Q9Y316 297 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 HEATR5BQ9P2D3 2071 aa7□□□□□ -1.29
VPS4A-203ENST00000564399 MPDZO75970 2070 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 ZNF407Q9C0G0 2248 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 FAM221AA4D161 298 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 OR5H15A6NDH6 313 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 C5orf60A6NFR6 353 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 NPIPA5E9PKD4 350 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 TTI1O43156 1089 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 AGTP01019 485 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 CELA2AP08217 269 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 ZGLP1P0C6A0 271 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 COX6A1P12074 109 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 ABOP16442 354 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms