RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 DOCK9Q9BZ29 2069 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 FAM221BA6H8Z2 402 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 GMNCA6NCL1 334 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 E2F3O00716 465 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 ARHGAP33O14559 1287 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 HGSO14964 777 aaPredicted RBP12.44□□□□□ -0.42
CLK3-214ENST00000564096 KHNYNO15037 678 aaKnown RBP12.44□□□□□ -0.42
CLK3-214ENST00000564096 EDF1O60869 148 aaKnown RBP12.44□□□□□ -0.42
CLK3-214ENST00000564096 ERGP11308 486 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 AGTR2P50052 363 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 PKNOX1P55347 436 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 UBE2IP63279 158 aaKnown RBP12.44□□□□□ -0.42
CLK3-214ENST00000564096 OCRLQ01968 901 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 HHEXQ03014 270 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 CLCQ05315 142 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 CDC16Q13042 620 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 PRKG2Q13237 762 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 TSTA3Q13630 321 aaPredicted RBP12.44□□□□□ -0.42
CLK3-214ENST00000564096 GTF2H2Q13888 395 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 CYP2A13Q16696 494 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 HLA-BQ31612 363 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 PTCHD3Q3KNS1 767 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 CCSMST1Q4G0I0 132 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 UNC50Q53HI1 259 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 C6orf132Q5T0Z8 1188 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 THEMIS2Q5TEJ8 643 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 GTF2H2CQ6P1K8 395 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 GOLGA7Q7Z5G4 137 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 KLHDC8AQ8IYD2 350 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 ARL10Q8N8L6 244 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 OR56A3Q8NH54 315 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 ZNF480Q8WV37 535 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 LCN9Q8WX39 176 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 SMPDL3AQ92484 453 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 ATP6V1E2Q96A05 226 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 GRAMD1AQ96CP6 724 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 FAR2Q96K12 515 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 CAMK1GQ96NX5 476 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 ZNF382Q96SR6 550 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 MIPEPQ99797 713 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 SIKE1Q9BRV8 207 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 HAUS8Q9BT25 410 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.44□□□□□ -0.42
CLK3-214ENST00000564096 ATG10Q9H0Y0 220 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 EPN3Q9H201 632 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 GSTO2Q9H4Y5 243 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 SEMA4BQ9NPR2 832 aaPredicted RBP12.44□□□□□ -0.42
CLK3-214ENST00000564096 NLGN3Q9NZ94 848 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 GPRC5BQ9NZH0 403 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 OR6C2Q9NZP2 312 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 CPNE7Q9UBL6 633 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 RAP2CQ9Y3L5 183 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 DYRK1BQ9Y463 629 aa12.44□□□□□ -0.42
CLK3-214ENST00000564096 CEP192Q8TEP8 1941 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 YY2O15391 372 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 TAPBPO15533 448 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 CCNDBP1O95273 360 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 EML2O95834 649 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 FASLGP48023 281 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 CCNG1P51959 295 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 BNC1Q01954 994 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 NAE1Q13564 534 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 DEFB133Q30KQ1 61 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 FBXO48Q5FWF7 155 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 ARL13AQ5H913 290 aaPredicted RBP12.43□□□□□ -0.42
CLK3-214ENST00000564096 PRAMEF14Q5SWL7 426 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 PRAMEF13Q5VWM6 474 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 KLHL35Q6PF15 583 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 EFL1Q7Z2Z2 1120 aaKnown RBP12.43□□□□□ -0.42
CLK3-214ENST00000564096 CPLX4Q7Z7G2 160 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 CUZD1Q86UP6 607 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 WDR75Q8IWA0 830 aaKnown RBP12.43□□□□□ -0.42
CLK3-214ENST00000564096 NAGSQ8N159 534 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 CHCHD4Q8N4Q1 142 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 TEX9Q8N6V9 391 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 OR2L8Q8NGY9 312 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 HMGCLL1Q8TB92 370 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 TRPC4APQ8TEL6 797 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 LRFN3Q9BTN0 628 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 FAM107BQ9H098 131 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 ILKAPQ9H0C8 392 aaPredicted RBP12.43□□□□□ -0.42
CLK3-214ENST00000564096 ARRDC1-AS1Q9H2J1 176 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 SRMSQ9H3Y6 488 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 GAREM1Q9H706 876 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 FGFR1OP2Q9NVK5 253 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 EVA1BQ9NVM1 165 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 PSD3Q9NYI0 1048 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 ZNF624Q9P2J8 865 aaPredicted RBP12.43□□□□□ -0.42
CLK3-214ENST00000564096 CIDEBQ9UHD4 219 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 PLAGL1Q9UM63 463 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.43□□□□□ -0.42
CLK3-214ENST00000564096 KCNE2Q9Y6J6 123 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 SPAG17Q6Q759 2223 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 MUC3AQ02505 3323 aa12.43□□□□□ -0.42
CLK3-214ENST00000564096 KRT87PA6NCN2 255 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 E7ENX8 843 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 SLCO1B7G3V0H7 640 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 CLGNO14967 610 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 ZW10O43264 779 aa12.42□□□□□ -0.42
CLK3-214ENST00000564096 LYPLA1O75608 230 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms