RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 BARD1Q99728 777 aaKnown RBP12.35□□□□□ -0.43
COMMD4-209ENST00000564068 TINF2Q9BSI4 451 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 VRTNQ9H8Y1 702 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 THUMPD1Q9NXG2 353 aaKnown RBP12.35□□□□□ -0.43
COMMD4-209ENST00000564068 DUX4Q9UBX2 424 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 GLUD1P00367 558 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 GPX3P22352 226 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 GRK4P32298 578 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 POLR2IP36954 125 aaKnown RBP12.35□□□□□ -0.43
COMMD4-209ENST00000564068 UGT2B15P54855 530 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 SEMG2Q02383 582 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 CLDN19Q8N6F1 224 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 OR10G2Q8NGC3 310 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 NLNQ9BYT8 704 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 AIG1Q9NVV5 245 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 CCDC59Q9P031 241 aaKnown RBP12.35□□□□□ -0.43
COMMD4-209ENST00000564068 PCDHGB3Q9Y5G1 929 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 ZSCAN5BA6NJL1 495 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 VIPP01282 170 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 CD1DP15813 335 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 HOXB6P17509 224 aaKnown RBP12.35□□□□□ -0.43
COMMD4-209ENST00000564068 FPR1P21462 350 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 LEPRP48357 1165 aaKnown RBP12.35□□□□□ -0.43
COMMD4-209ENST00000564068 GNG2P59768 71 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 C5orf22Q49AR2 442 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 LCN1P1Q5VSP4 162 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 KIAA1614Q5VZ46 1190 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 DSG4Q86SJ6 1040 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 OR52B6Q8NGF0 335 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 ZNF671Q8TAW3 534 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 SLC38A4Q969I6 547 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 TMEM125Q96AQ2 219 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 MRGPRX2Q96LB1 330 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 RDH12Q96NR8 316 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 GSTO2Q9H4Y5 243 aa12.35□□□□□ -0.43
COMMD4-209ENST00000564068 PRAMEF1O95521 474 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 CCNYL3P0C7X3 344 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 ENGP17813 658 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 SNAPC1Q16533 368 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 CRTC2Q53ET0 693 aaPredicted RBP12.34□□□□□ -0.43
COMMD4-209ENST00000564068 TRIM40Q6P9F5 258 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 CXCL17Q6UXB2 119 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 TRMT11Q7Z4G4 463 aaKnown RBP12.34□□□□□ -0.43
COMMD4-209ENST00000564068 ELMOD2Q8IZ81 293 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 C7orf57Q8NEG2 295 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 TMEM174Q8WUU8 243 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 TADA1Q96BN2 335 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 C12orf42Q96LP6 360 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 SLC22A4Q9H015 551 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 SDR39U1Q9NRG7 319 aaPredicted RBP12.34□□□□□ -0.43
COMMD4-209ENST00000564068 FADS2P1A8MWK0 482 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 S1PR4O95977 384 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 DHFRP00374 187 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 IQCF3P0C7M6 154 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 ZNF24P17028 368 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 WEE1P30291 646 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 SHMT2P34897 504 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 ATP12AP54707 1039 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 OR4D1Q15615 310 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 CYBRD1Q53TN4 286 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 DESI1Q6ICB0 168 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 HMBOX1Q6NT76 420 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 TAPT1Q6NXT6 567 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 ERAP2Q6P179 960 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 LARP4Q71RC2 724 aaKnown RBP eCLIP12.34□□□□□ -0.434e-6■■■■■ 28.7
COMMD4-209ENST00000564068 LAPTM4BQ86VI4 370 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 ZNF784Q8NCA9 323 aaPredicted RBP12.34□□□□□ -0.43
COMMD4-209ENST00000564068 COPS8Q99627 209 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 NMUR1Q9HB89 426 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 IGSF5Q9NSI5 407 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 ANGPT4Q9Y264 503 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 LCHNA4D1U4 455 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 STBD1O95210 358 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 CD1EP15812 388 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 MAGEA3P43357 314 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 RORCP51449 518 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 ATN1P54259 1190 aaPredicted RBP12.34□□□□□ -0.43
COMMD4-209ENST00000564068 RPP38P78345 283 aaKnown RBP12.34□□□□□ -0.43
COMMD4-209ENST00000564068 VN1R5Q7Z5H4 357 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 KRTCAP2Q8N6L1 136 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 ZNF486Q96H40 463 aaPredicted RBP12.34□□□□□ -0.43
COMMD4-209ENST00000564068 OSBPL2Q9H1P3 480 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 MED28Q9H204 178 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 NECTIN3Q9NQS3 549 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 TAS2R9Q9NYW1 312 aa12.34□□□□□ -0.43
COMMD4-209ENST00000564068 I3L521 148 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 TPST2O60704 377 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 ALDOCP09972 364 aaKnown RBP12.33□□□□□ -0.44
COMMD4-209ENST00000564068 CRHBPP24387 322 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 ACVRL1P37023 503 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 EMX2Q04743 252 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 CHIT1Q13231 466 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 PARP15Q460N3 678 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 TIGD5Q53EQ6 642 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 CDC73Q6P1J9 531 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 MSANTD2Q6P1R3 559 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 LGI4Q8N135 537 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 TSPEARQ8WU66 669 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 RASSF5Q8WWW0 418 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 RPL3LQ92901 407 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms