RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ARNTLO00327 626 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 NPC1O15118 1278 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 RNASEH1O60930 286 aaKnown RBP18.59■□□□□ 0.57
SMPD3-203ENST00000563226 KAT7O95251 611 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 CAPNS1P04632 268 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 MTHFD1P11586 935 aaKnown RBP18.59■□□□□ 0.57
SMPD3-203ENST00000563226 BCKDHAP12694 445 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 UQCRBP14927 111 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 CNTN1Q12860 1018 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 BNIP2Q12982 314 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 CHIT1Q13231 466 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 HMBOX1Q6NT76 420 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 ZNF765Q7L2R6 523 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 TRAPPC5Q8IUR0 188 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 TMEM126BQ8IUX1 230 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 ZUFSPQ96AP4 578 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 PIF1Q9H611 641 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 DYRK4Q9NR20 520 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 ASIC5Q9NY37 505 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 SNX6Q9UNH7 406 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 PCYT1BQ9Y5K3 369 aaPredicted RBP18.59■□□□□ 0.57
SMPD3-203ENST00000563226 DYTNA2CJ06 578 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 E7EQ34 232 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 LIN7AO14910 233 aaPredicted RBP18.59■□□□□ 0.57
SMPD3-203ENST00000563226 NCK1P16333 377 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 WASP42768 502 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 HYAL1Q12794 435 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 NAE1Q13564 534 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 FAM174BQ3ZCQ3 159 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 TMEM52BQ4KMG9 183 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 SPANXN4Q5MJ08 99 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 CACHD1Q5VU97 1274 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 LCN8Q6JVE9 175 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 AGTRAPQ6RW13 159 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 THOC6Q86W42 341 aaKnown RBP18.59■□□□□ 0.57
SMPD3-203ENST00000563226 ICA1LQ8NDH6 482 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 OR4K3Q96R72 315 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 PKP4Q99569 1192 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 CDCA3Q99618 268 aaPredicted RBP18.59■□□□□ 0.57
SMPD3-203ENST00000563226 KCTD14Q9BQ13 255 aaPredicted RBP18.59■□□□□ 0.57
SMPD3-203ENST00000563226 DPY30Q9C005 99 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 ACTR3BQ9P1U1 418 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 ATXN10Q9UBB4 475 aa18.59■□□□□ 0.57
SMPD3-203ENST00000563226 SPTBN5Q9NRC6 3674 aaKnown RBP18.59■□□□□ 0.57
SMPD3-203ENST00000563226 TIPRLO75663 272 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 STAMBPO95630 424 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 SLC16A8O95907 504 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 CATP04040 527 aaKnown RBP18.58■□□□□ 0.57
SMPD3-203ENST00000563226 IMPA1P29218 277 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 MTPNP58546 118 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 MRPS35P82673 323 aaKnown RBP18.58■□□□□ 0.57
SMPD3-203ENST00000563226 BCL7AQ4VC05 210 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 TMEM154Q6P9G4 183 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 HID1Q8IV36 788 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 ZNF547Q8IVP9 402 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 CFAP206Q8IYR0 622 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 PLA2G15Q8NCC3 412 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 ADCY4Q8NFM4 1077 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 SLC13A3Q8WWT9 602 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 MED8Q96G25 268 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 APIPQ96GX9 242 aa18.58■□□□□ 0.57
SMPD3-203ENST00000563226 RPP25Q9BUL9 199 aaKnown RBP18.58■□□□□ 0.57
SMPD3-203ENST00000563226 ATG2BQ96BY7 2078 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 DOCK9Q9BZ29 2069 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 GRXCR2A6NFK2 248 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 CLGNO14967 610 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 SMNDC1O75940 238 aaKnown RBP eCLIP18.58■□□□□ 0.56
SMPD3-203ENST00000563226 JUPP14923 745 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 PSMC3P17980 439 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 TACR1P25103 407 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 EEFSECP57772 596 aaKnown RBP18.58■□□□□ 0.56
SMPD3-203ENST00000563226 DPTQ07507 201 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 FRG2Q64ET8 278 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 PARM1Q6UWI2 310 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 AMIGO2Q86SJ2 522 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 RALGPS2Q86X27 583 aaPredicted RBP18.58■□□□□ 0.56
SMPD3-203ENST00000563226 LMNTD1Q8N9Z9 388 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 FGF14Q92915 247 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 CCDC138Q96M89 665 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 FRG2BQ96QU4 278 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 ZBTB18Q99592 522 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 CGREF1Q99674 301 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 CLMPQ9H6B4 373 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 EPHX3Q9H6B9 360 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 FADS3Q9Y5Q0 445 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 SNX13Q9Y5W8 968 aa18.58■□□□□ 0.56
SMPD3-203ENST00000563226 H3BM21 787 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 IFRD1O00458 451 aaPredicted RBP18.57■□□□□ 0.56
SMPD3-203ENST00000563226 DFNA5O60443 496 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 NPPAP01160 153 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 ZNF8P17098 575 aaPredicted RBP18.57■□□□□ 0.56
SMPD3-203ENST00000563226 OXTRP30559 389 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 OR4D2P58180 307 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 IRF8Q02556 426 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 FOLH1Q04609 750 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 PWP1Q13610 501 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 MTX3Q5HYI7 312 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 PIP5KL1Q5T9C9 394 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 ANKRD54Q6NXT1 300 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 CRTC3Q6UUV7 619 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms