RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 KRTCAP2Q8N6L1 136 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 BEND7Q8N7W2 519 aaPredicted RBP12.78□□□□□ -0.36
USB1-207ENST00000563149 KLHL23Q8NBE8 558 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 SLC43A3Q8NBI5 491 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 NETO1Q8TDF5 533 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 S100ZQ8WXG8 99 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 UPF1Q92900 1129 aaKnown RBP eCLIP12.78□□□□□ -0.36
USB1-207ENST00000563149 ALG14Q96F25 216 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 CMTM7Q96FZ5 175 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 VMP1Q96GC9 406 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 TRMT2BQ96GJ1 504 aaKnown RBP12.78□□□□□ -0.36
USB1-207ENST00000563149 ARHGAP39Q9C0H5 1083 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 TNKS2Q9H2K2 1166 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 PARVBQ9HBI1 364 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 IL26Q9NPH9 171 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 SERHLQ9NQF3 203 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 AFF4Q9UHB7 1163 aaKnown RBP12.78□□□□□ -0.36
USB1-207ENST00000563149 VPS51Q9UID3 782 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 TSR3Q9UJK0 312 aaKnown RBP12.78□□□□□ -0.36
USB1-207ENST00000563149 SNX6Q9UNH7 406 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 FCF1Q9Y324 198 aaKnown RBP12.78□□□□□ -0.36
USB1-207ENST00000563149 TPRKBQ9Y3C4 175 aa12.78□□□□□ -0.36
USB1-207ENST00000563149 PLXNA4Q9HCM2 1894 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 A0A0U1RQS6 177 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 C1orf232A0A0U1RR37 186 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 FUOMA2VDF0 154 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 KPNA4O00629 521 aaPredicted RBP12.77□□□□□ -0.36
USB1-207ENST00000563149 BCKDKO14874 412 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 AREL1O15033 823 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 UGT2B4P06133 528 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 IRF1P10914 325 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 HTR1BP28222 390 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 NSG1P42857 185 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 TRPC1P48995 793 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 PRKCZQ05513 592 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 ABRQ12979 859 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 LAPTM5Q13571 262 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 ATXN7L2Q5T6C5 722 aaPredicted RBP12.77□□□□□ -0.36
USB1-207ENST00000563149 CPZQ66K79 652 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 RETSATQ6NUM9 610 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 SLC16A12Q6ZSM3 486 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 NEK10Q6ZWH5 1172 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 DET1Q7L5Y6 550 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 TMEM179BQ7Z7N9 219 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 PHACTR4Q8IZ21 702 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 HS3ST5Q8IZT8 346 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 ZBTB8BQ8NAP8 495 aaPredicted RBP12.77□□□□□ -0.36
USB1-207ENST00000563149 ABHD11Q8NFV4 315 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 TSEN34Q9BSV6 310 aaKnown RBP12.77□□□□□ -0.36
USB1-207ENST00000563149 WDR12Q9GZL7 423 aaKnown RBP12.77□□□□□ -0.36
USB1-207ENST00000563149 RNF38Q9H0F5 515 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 RRAGCQ9HB90 399 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 HMG20AQ9NP66 347 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 NECTIN3Q9NQS3 549 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 UTS2RQ9UKP6 389 aa12.77□□□□□ -0.36
USB1-207ENST00000563149 UTRNP46939 3433 aa12.77□□□□□ -0.37
USB1-207ENST00000563149 CASP8AP2Q9UKL3 1982 aa12.77□□□□□ -0.37
USB1-207ENST00000563149 THSD7BQ9C0I4 1608 aa12.77□□□□□ -0.37
USB1-207ENST00000563149 EVPLLA8MZ36 301 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 NT5C1B-RDH14C9J2C7 533 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 CLDN25C9JDP6 229 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 SLC22A1O15245 554 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 GABARAPO95166 117 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 TFPTP0C1Z6 253 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 SELPP16109 830 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 BPIP17213 487 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 AGXTP21549 392 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 BCAP31P51572 246 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 MAPK10P53779 464 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 PHC1P78364 1004 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 ZNF33BQ06732 778 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 BOP1Q14137 746 aaKnown RBP12.76□□□□□ -0.37
USB1-207ENST00000563149 DPY19L1Q2PZI1 675 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 GTDC1Q4AE62 458 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 SGO1Q5FBB7 561 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 ERICH5Q6P6B1 374 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 SERPINA11Q86U17 422 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 ZDHHC21Q8IVQ6 265 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 CHPFQ8IZ52 775 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 NXPE1Q8N323 547 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 MINDY2Q8NBR6 621 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 FRS2Q8WU20 508 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 SELENOMQ8WWX9 145 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 WBP2Q969T9 261 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 ITPKCQ96DU7 683 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 SH3YL1Q96HL8 342 aaPredicted RBP12.76□□□□□ -0.37
USB1-207ENST00000563149 HHIPQ96QV1 700 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 LYSMD1Q96S90 227 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 C2orf49Q9BVC5 232 aaPredicted RBP12.76□□□□□ -0.37
USB1-207ENST00000563149 ACPTQ9BZG2 426 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 TM9SF3Q9HD45 589 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 GIN1Q9NXP7 522 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 SCN3BQ9NY72 215 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 ZDHHC3Q9NYG2 299 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 GFRA2O00451 464 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 ADAM12O43184 909 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 CLDN7O95471 211 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 ANGPTL1O95841 491 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 PDYNP01213 254 aa12.76□□□□□ -0.37
USB1-207ENST00000563149 IGFBP5P24593 272 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms