RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 DKK1O94907 266 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 GUCA1CO95843 209 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 SLC16A8O95907 504 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 GSTA1P08263 222 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 ANXA5P08758 320 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 RBP1P09455 135 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 TPBGLP0DKB5 382 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 POLR2CP19387 275 aaPredicted RBP18.23■□□□□ 0.51
RAB40C-207ENST00000563109 CSF2RBP32927 897 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 ID4P47928 161 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 PNLIPRP1P54315 467 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 CDKL1Q00532 357 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 INSM1Q01101 510 aaPredicted RBP18.23■□□□□ 0.51
RAB40C-207ENST00000563109 SQSTM1Q13501 440 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 OR4D1Q15615 310 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 CYP2A13Q16696 494 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 IRGCQ6NXR0 463 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 USP53Q70EK8 1073 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 CLEC14AQ86T13 490 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 TRABD2AQ86V40 505 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 PLD6Q8N2A8 252 aaKnown RBP18.23■□□□□ 0.51
RAB40C-207ENST00000563109 RHEBL1Q8TAI7 183 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 ZDHHC12Q96GR4 267 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 NUDT22Q9BRQ3 303 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 MENTQ9BUN1 341 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 SENP1Q9P0U3 644 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 ENTPD2Q9Y5L3 495 aa18.23■□□□□ 0.51
RAB40C-207ENST00000563109 SUPT3HB4E1H0 165 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 BTN3A3O00478 584 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 CAPN5O15484 640 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-207ENST00000563109 SUPT3HO75486 399 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 CHRM5P08912 532 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-207ENST00000563109 ERGP11308 486 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 KRT4P19013 534 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 TSTA3Q13630 321 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-207ENST00000563109 KIR2DS3Q14952 304 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 TGFBIQ15582 683 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 MBOAT1Q6ZNC8 495 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 ISCA2Q86U28 154 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 TAX1BP1Q86VP1 789 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 SRRM1Q8IYB3 904 aaKnown RBP18.22■□□□□ 0.51
RAB40C-207ENST00000563109 ADGRF3Q8IZF5 1079 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 TCAIMQ8N3R3 496 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 HMGCLL1Q8TB92 370 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 DENND1AQ8TEH3 1009 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 ZNF480Q8WV37 535 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 SMPDL3AQ92484 453 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 SLC22A18Q96BI1 424 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 FBXL8Q96CD0 374 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 TGM7Q96PF1 710 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 SMC6Q96SB8 1091 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 RAB33BQ9H082 229 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 ACTR10Q9NZ32 417 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 NUDT4Q9NZJ9 180 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 CD274Q9NZQ7 290 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 STOX2Q9P2F5 926 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-207ENST00000563109 EPHA6Q9UF33 1036 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 DCDC2Q9UHG0 476 aa18.22■□□□□ 0.51
RAB40C-207ENST00000563109 MN1Q10571 1320 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-207ENST00000563109 PIEZO1Q92508 2521 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 ASXL3Q9C0F0 2248 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 NCF1BA6NI72 391 aaPredicted RBP18.21■□□□□ 0.51
RAB40C-207ENST00000563109 NCF1CA8MVU1 366 aaPredicted RBP18.21■□□□□ 0.51
RAB40C-207ENST00000563109 FOXO6A8MYZ6 492 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 ISM1B1AKI9 464 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 COPEO14579 308 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 TOP3BO95985 862 aaKnown RBP18.21■□□□□ 0.51
RAB40C-207ENST00000563109 NCF1P14598 390 aaPredicted RBP18.21■□□□□ 0.51
RAB40C-207ENST00000563109 IMPA1P29218 277 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 CCT5P48643 541 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 HNMTP50135 292 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 TECRLQ5HYJ1 363 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 CDKL4Q5MAI5 379 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 HES3Q5TGS1 186 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 TMEM71Q6P5X7 295 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 C4orf33Q8N1A6 199 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 C2orf73Q8N5S3 287 aaPredicted RBP18.21■□□□□ 0.51
RAB40C-207ENST00000563109 LINC01555Q8NAE3 123 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 OR4D9Q8NGE8 314 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 PGM2Q96G03 612 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 MED8Q96G25 268 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 TMEM74Q96NL1 305 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 GPR78Q96P69 363 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 DEPDC7Q96QD5 511 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 CD180Q99467 661 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 NRTNQ99748 197 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 IQCGQ9H095 443 aaKnown RBP18.21■□□□□ 0.51
RAB40C-207ENST00000563109 MRPL46Q9H2W6 279 aaKnown RBP18.21■□□□□ 0.51
RAB40C-207ENST00000563109 VIPAS39Q9H9C1 493 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 CCDC177Q9NQR7 707 aaPredicted RBP18.21■□□□□ 0.51
RAB40C-207ENST00000563109 XPR1Q9UBH6 696 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 CEP250Q9BV73 2442 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 ANKRD12Q6UB98 2062 aa18.21■□□□□ 0.51
RAB40C-207ENST00000563109 CCND1P24385 295 aa18.2■□□□□ 0.5
RAB40C-207ENST00000563109 RPA3P35244 121 aaPredicted RBP18.2■□□□□ 0.5
RAB40C-207ENST00000563109 GFERP55789 205 aa18.2■□□□□ 0.5
RAB40C-207ENST00000563109 PHF19Q5T6S3 580 aa18.2■□□□□ 0.5
RAB40C-207ENST00000563109 THEMIS2Q5TEJ8 643 aa18.2■□□□□ 0.5
RAB40C-207ENST00000563109 AGTRAPQ6RW13 159 aa18.2■□□□□ 0.5
RAB40C-207ENST00000563109 ADAMTS14Q8WXS8 1223 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms