RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 SDHCQ99643 169 aaPredicted RBP13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 TBCDQ9BTW9 1192 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 COLEC11Q9BWP8 271 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 CCNB1IP1Q9NPC3 277 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 TMLHEQ9NVH6 421 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 VNN3Q9NY84 501 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 TAS2R9Q9NYW1 312 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 RNF6Q9Y252 685 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 GMPPBQ9Y5P6 360 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 GRXCR2A6NFK2 248 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 TMEM189-UBE2V1I3L0A0 370 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 ARNTLO00327 626 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 HLA-DQB2P05538 268 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 ARSDP51689 593 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 GPR50Q13585 617 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 DUSP7Q16829 419 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 TYSND1Q2T9J0 566 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 TBRG1Q3YBR2 411 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 SOWAHCQ53LP3 525 aaPredicted RBP13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 YIF1BQ5BJH7 314 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 ZNF549Q6P9A3 640 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 NRARPQ7Z6K4 114 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 LRRTM3Q86VH5 581 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 OR8J3Q8NGG0 315 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 UBE2FQ969M7 185 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 SPATA17Q96L03 361 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 NEDD4LQ96PU5 975 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 THUMPD3Q9BV44 507 aaKnown RBP13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 TKTL2Q9H0I9 626 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 RNF167Q9H6Y7 350 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 RPRD1BQ9NQG5 326 aaKnown RBP13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 MKLN1Q9UL63 735 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 NLRC5Q86WI3 1866 aa13.38□□□□□ -0.27
AC040174.1-201ENST00000563003 A0A0U1RQS6 177 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 SUPT3HB4E1H0 165 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 F8W810 466 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 H3BQ06 376 aaPredicted RBP13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 M0R082 166 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 CAPN5O15484 640 aaPredicted RBP13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 SLC7A4O43246 635 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 PAPSS2O95340 614 aaPredicted RBP13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 FDXRP22570 491 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 RRM2P31350 389 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 KRT20P35900 424 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 CTSKP43235 329 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 PPP3CCP48454 512 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 KEAP1Q14145 624 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 STARD3Q14849 445 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 PON2Q15165 354 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 ANKS6Q68DC2 871 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 CTU1Q7Z7A3 348 aaKnown RBP13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 DEPDC4Q8N2C3 294 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 FBXO39Q8N4B4 442 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 ATPAF2Q8N5M1 289 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 NATD1Q8N6N6 113 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 RNF170Q96K19 258 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 CITED4Q96RK1 184 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 SIGLEC11Q96RL6 698 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 IKZF5Q9H5V7 419 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 WDCPQ9H6R7 721 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 ZFP14Q9HCL3 533 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 RASSF1Q9NS23 344 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 RBM22Q9NW64 420 aaKnown RBP eCLIP13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 TMEM161AQ9NX61 479 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 SAGE1Q9NXZ1 904 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 TBC1D24Q9ULP9 559 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 BTBD3Q9Y2F9 522 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 HSPE1-MOB4S4R3N1 261 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 CXCR6O00574 342 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 F9P00740 461 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 ZNF37AP17032 561 aaPredicted RBP13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 EPHA2P29317 976 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 SLC15A1P46059 708 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 WNT3AP56704 352 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 ZNF33AQ06730 810 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 MAD2L1BPQ15013 274 aaPredicted RBP13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 COL13A1Q5TAT6 717 aaPredicted RBP13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 BHLHA9Q7RTU4 235 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 VN1R5Q7Z5H4 357 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 GALNT7Q86SF2 657 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 OR10Q1Q8NGQ4 319 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 RHEBL1Q8TAI7 183 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 FAM193BQ96PV7 902 aaPredicted RBP13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 DHRS9Q9BPW9 319 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 NUSAP1Q9BXS6 441 aaKnown RBP13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 ACTL8Q9H568 366 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 ERVK13-1Q9NX77 482 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 RAPGEFL1Q9UHV5 662 aa13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 MRPL42Q9Y6G3 142 aaKnown RBP13.37□□□□□ -0.27
AC040174.1-201ENST00000563003 A0A0G2JMP0 313 aa13.36□□□□□ -0.27
AC040174.1-201ENST00000563003 ELOVL7A1L3X0 281 aa13.36□□□□□ -0.27
AC040174.1-201ENST00000563003 KRT87PA6NCN2 255 aa13.36□□□□□ -0.27
AC040174.1-201ENST00000563003 FAM25AB3EWG3 89 aa13.36□□□□□ -0.27
AC040174.1-201ENST00000563003 FAM25CB3EWG5 89 aa13.36□□□□□ -0.27
AC040174.1-201ENST00000563003 FAM25GB3EWG6 89 aa13.36□□□□□ -0.27
AC040174.1-201ENST00000563003 B4GALT3O60512 393 aa13.36□□□□□ -0.27
AC040174.1-201ENST00000563003 MAFKO60675 156 aa13.36□□□□□ -0.27
AC040174.1-201ENST00000563003 MRPS14O60783 128 aaKnown RBP13.36□□□□□ -0.27
AC040174.1-201ENST00000563003 SERPINF2P08697 491 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 451.5 ms