RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 CYP11A1P05108 521 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 ERP29P30040 261 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 HNF4AP41235 474 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 GLUD2P49448 558 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 NKX3-2P78367 333 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 SOWAHCQ53LP3 525 aaPredicted RBP13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 PSTKQ8IV42 348 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 PKMYT1Q99640 499 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 GSTO2Q9H4Y5 243 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 CARS2Q9HA77 564 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 NMUR1Q9HB89 426 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 SLC52A3Q9NQ40 469 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 DNAJB9Q9UBS3 223 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 SLC12A8A0AV02 714 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 ASPDHA6ND91 283 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 AGRPO00253 132 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 DFFAO00273 331 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 KATNA1O75449 491 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 AP2A1O95782 977 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 JCHAINP01591 159 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 CYBBP04839 570 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 JUNDP17535 347 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 MSH3P20585 1137 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 CXCR3P49682 368 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 SLC12A2P55011 1212 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 IL1RL1Q01638 556 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 BNC1Q01954 994 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 SIM2Q14190 667 aaPredicted RBP13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 IRF3Q14653 427 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 GLB1LQ6UWU2 654 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 ZNF767PQ75MW2 155 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 GALNT5Q7Z7M9 940 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 FBXO30Q8TB52 745 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 RAET1EQ8TD07 263 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 GIMAP1Q8WWP7 306 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 TMEM80Q96HE8 168 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 TRNT1Q96Q11 434 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 APOL4Q9BPW4 351 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 ITPAQ9BY32 194 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 ZNF556Q9HAH1 456 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 SDR39U1Q9NRG7 319 aaPredicted RBP13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 TMEM39AQ9NV64 488 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 UTS2RQ9UKP6 389 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 DNAJC15Q9Y5T4 150 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 LYVE1Q9Y5Y7 322 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 CYP7B1O75881 506 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 CYP4B1P13584 511 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 HGFP14210 728 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 POU3F3P20264 500 aaPredicted RBP13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 DIO3P55073 304 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 CDH13P55290 713 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 KCNK10P57789 538 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 B2MP61769 119 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 MVKQ03426 396 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 BTBD16Q32M84 506 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 KDELC2Q7Z4H8 507 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 THEM5Q8N1Q8 247 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 LHFPL5Q8TAF8 219 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 UBASH3BQ8TF42 649 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 FBLIM1Q8WUP2 373 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 NTAN1Q96AB6 310 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 TUBGCP3Q96CW5 907 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 TOE1Q96GM8 510 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 SLC9A7Q96T83 725 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 ZNF304Q9HCX3 659 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 CASS4Q9NQ75 786 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 OSER1Q9NX31 292 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 EIF3KQ9UBQ5 218 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 MAGEL2Q9UJ55 1249 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 RNF6Q9Y252 685 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 U3KQV3 271 aa13.72□□□□□ -0.21
GTF3C1-203ENST00000562609 NT5C1B-RDH14C9J2C7 533 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 E5RI56 91 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 PIP5K1BO14986 540 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 MITFO75030 526 aaPredicted RBP13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 FAM20BO75063 409 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 MATN4O95460 622 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 NFKB1P19838 968 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 KPNA2P52292 529 aaKnown RBP13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 TECRLQ5HYJ1 363 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 COQ5Q5HYK3 327 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 CCNJQ5T5M9 372 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 PM20D1Q6GTS8 502 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 ENPP6Q6UWR7 440 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 TRIM48Q8IWZ4 208 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 OR4M2Q8NGB6 313 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 MARVELD3Q96A59 401 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 CCDC126Q96EE4 140 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 SUSD3Q96L08 255 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 CEP19Q96LK0 163 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 TEX37Q96LM6 180 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 Q96MT0 163 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 ACOX2Q99424 681 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 GPBP1L1Q9HC44 474 aaPredicted RBP13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 NSMCE4AQ9NXX6 385 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 MPP6Q9NZW5 540 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 SRRDQ9UH36 339 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 ATPIF1Q9UII2 106 aa13.71□□□□□ -0.21
GTF3C1-203ENST00000562609 ORC6Q9Y5N6 252 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms