RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 YIPF1Q9Y548 306 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 GSTT2BP0CG30 244 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 PCSK2P16519 638 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 CLCN4P51793 760 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 GANABQ14697 944 aaKnown RBP11.03□□□□□ -0.64
RPAP1-204ENST00000562303 CRTC2Q53ET0 693 aaPredicted RBP11.03□□□□□ -0.64
RPAP1-204ENST00000562303 YTHDF3Q7Z739 585 aaKnown RBP11.03□□□□□ -0.64
RPAP1-204ENST00000562303 SLC51AQ86UW1 340 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 SLC30A8Q8IWU4 369 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 SVOPLQ8N434 492 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 ZNF676Q8N7Q3 588 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 RGMAQ96B86 450 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 ZCCHC3Q9NUD5 404 aaKnown RBP11.03□□□□□ -0.64
RPAP1-204ENST00000562303 FBXL12Q9NXK8 326 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 SRRM3A6NNA2 597 aaPredicted RBP11.02□□□□□ -0.64
RPAP1-204ENST00000562303 YJEFN3A6XGL0 299 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 ARVCFO00192 962 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 SCDO00767 359 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 MUSKO15146 869 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 TBX1O43435 398 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 RLN2P04090 185 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 MYCLP1P12525 358 aaPredicted RBP11.02□□□□□ -0.64
RPAP1-204ENST00000562303 RPL19P84098 196 aaKnown RBP11.02□□□□□ -0.64
RPAP1-204ENST00000562303 SLC10A7Q0GE19 358 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 CRHR2Q13324 411 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 TIGD5Q53EQ6 642 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 C6orf52Q5T4I8 152 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 THOC7Q6I9Y2 204 aaKnown RBP11.02□□□□□ -0.64
RPAP1-204ENST00000562303 LRRTM4Q86VH4 590 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 OR5M3Q8NGP4 307 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 TOP1MTQ969P6 601 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 C8orf48Q96LL4 319 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 ZNF347Q96SE7 839 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 NUSAP1Q9BXS6 441 aaKnown RBP11.02□□□□□ -0.64
RPAP1-204ENST00000562303 TAS2R7Q9NYW3 318 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 TLR6Q9Y2C9 796 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 NPIPA5E9PKD4 350 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 K7EPI3 171 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 CDC7O00311 574 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 ERI3O43414 337 aaKnown RBP11.02□□□□□ -0.64
RPAP1-204ENST00000562303 TGFB1P01137 390 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 CHRM5P08912 532 aaPredicted RBP11.02□□□□□ -0.64
RPAP1-204ENST00000562303 ETS2P15036 469 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 CLCNKAP51800 687 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 RPS24P62847 133 aaKnown RBP11.02□□□□□ -0.64
RPAP1-204ENST00000562303 CD47Q08722 323 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 SCARB2Q14108 478 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 GXYLT1Q4G148 440 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 KLHL22Q53GT1 634 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 PRAMEF14Q5SWL7 426 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 PRAMEF13Q5VWM6 474 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 NAPRTQ6XQN6 538 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 ZNF548Q8NEK5 533 aaPredicted RBP11.02□□□□□ -0.64
RPAP1-204ENST00000562303 SLC13A3Q8WWT9 602 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 ACDQ96AP0 544 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 METTL7AQ9H8H3 244 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 NPIPA1Q9UND3 350 aa11.02□□□□□ -0.64
RPAP1-204ENST00000562303 FAM237AA0A1B0GTK4 181 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 L7N2F9 121 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 PPP1R11O60927 126 aaPredicted RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 GJA1P17302 382 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 AZGP1P25311 298 aaKnown RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 ARF3P61204 181 aaPredicted RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 VAMP2P63027 116 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 ARF1P84077 181 aaKnown RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 ELOAQ14241 798 aaKnown RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 CNKSR3Q6P9H4 555 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 FIP1L1Q6UN15 594 aaKnown RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 ZNF662Q6ZS27 426 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 AVL9Q8NBF6 648 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 NLGN2Q8NFZ4 835 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 TMEM125Q96AQ2 219 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 KIAA1143Q96AT1 154 aaPredicted RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 DGCR14Q96DF8 476 aaKnown RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 C7orf26Q96N11 449 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 GKN1Q9NS71 199 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 RPL26L1Q9UNX3 145 aaKnown RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 ABCA9Q8IUA7 1624 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 CAPN8A6NHC0 703 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 AIREO43918 545 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 IL33O95760 270 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 GBX2P52951 348 aaPredicted RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 NFKB2Q00653 900 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 PCBP2Q15366 365 aaKnown RBP eCLIP11.02□□□□□ -0.653e-7■■■□□ 17.5
RPAP1-204ENST00000562303 ZNF776Q68DI1 518 aaPredicted RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 NXPE1Q8N323 547 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 NAT14Q8WUY8 206 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 BORCS5Q969J3 196 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 PNPLA2Q96AD5 504 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 UNC93B1Q9H1C4 597 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 ZDHHC3Q9NYG2 299 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 CCDC59Q9P031 241 aaKnown RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 CFL2Q9Y281 166 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 PCDHB3Q9Y5E6 796 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 PCDHGB1Q9Y5G3 927 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 A0A0G2JLL6 359 aaPredicted RBP11.02□□□□□ -0.65
RPAP1-204ENST00000562303 EDDM13A0A1B0GTR0 161 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 UGT1A9O60656 530 aa11.02□□□□□ -0.65
RPAP1-204ENST00000562303 TBX18O95935 607 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms