RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 GPRIN3Q6ZVF9 776 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 UBE2R2Q712K3 238 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 TRIM74Q86UV6 250 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 LONP2Q86WA8 852 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 TMPRSS6Q8IU80 811 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 FUNDC1Q8IVP5 155 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 SLC22A15Q8IZD6 547 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 GJD3Q8N144 294 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 HDDC3Q8N4P3 179 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 POU5F2Q8N7G0 328 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 TP53I13Q8NBR0 393 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 FBXO15Q8NCQ5 510 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 FAM13CQ8NE31 585 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 OR2T11Q8NH01 316 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 CSGALNACT1Q8TDX6 532 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 CXorf40AQ8TE69 158 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 ASZ1Q8WWH4 475 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 ELMO1Q92556 727 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 FBXL8Q96CD0 374 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 C19orf60Q96EN9 201 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 MARK4Q96L34 752 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 CATSPER2Q96P56 530 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 SERINC2Q96SA4 455 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 NTMT1Q9BV86 223 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 TEX101Q9BY14 249 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 SLC6A17Q9H1V8 727 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 MMADHCQ9H3L0 296 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 C8orf33Q9H7E9 229 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 NOL11Q9H8H0 719 aaKnown RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 FBRSQ9HAH7 460 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 SLC52A3Q9NQ40 469 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 DYRK4Q9NR20 520 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 MBNL1Q9NR56 388 aaKnown RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 HEBP1Q9NRV9 189 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 ATXN10Q9UBB4 475 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 GIMAP2Q9UG22 337 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 MUTYHQ9UIF7 546 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 ACAD8Q9UKU7 415 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 TIMM22Q9Y584 194 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 PIAS3Q9Y6X2 628 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 COL6A3P12111 3177 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 PRUNE2Q8WUY3 3088 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 A0A088AWK7 358 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 C17orf113A0A1B0GUU1 675 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 A0A1W2PP55 124 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 A0A1W2PRQ8 180 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 KRT87PA6NCN2 255 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 UBDO15205 165 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 NARSO43776 548 aaKnown RBP6.36□□□□□ -1.39
CAPN3-210ENST00000561817 VEGFDO43915 354 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 RNASEH1O60930 286 aaKnown RBP6.36□□□□□ -1.39
CAPN3-210ENST00000561817 ATG13O75143 517 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 KLF8O95600 359 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-210ENST00000561817 GUCA1CO95843 209 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 FUCA1P04066 466 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 GLULP15104 373 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 ITGAXP20702 1163 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 DRD1P21728 446 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 ACADLP28330 430 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 PDHA2P29803 388 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 GDF5P43026 501 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 GPR1P46091 355 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 EIF1AXP47813 144 aaKnown RBP6.36□□□□□ -1.39
CAPN3-210ENST00000561817 ZFP36L2P47974 494 aaKnown RBP6.36□□□□□ -1.39
CAPN3-210ENST00000561817 PREPP48147 710 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 AP1S2P56377 157 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 MRPS21P82921 87 aaKnown RBP6.36□□□□□ -1.39
CAPN3-210ENST00000561817 CCINQ13939 588 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 BOP1Q14137 746 aaKnown RBP6.36□□□□□ -1.39
CAPN3-210ENST00000561817 E2F2Q14209 437 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 SQLEQ14534 574 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 MLC1Q15049 377 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 TOMM20Q15388 145 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 CCSMST1Q4G0I0 132 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 TM4SF20Q53R12 229 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 TCHHL1Q5QJ38 904 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-210ENST00000561817 RAET1GQ6H3X3 334 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 ALKBH2Q6NS38 261 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 NEK5Q6P3R8 708 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 FAM83HQ6ZRV2 1179 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-210ENST00000561817 FRA10AC1Q70Z53 315 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 LRRC70Q7Z2Q7 622 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 EFL1Q7Z2Z2 1120 aaKnown RBP6.36□□□□□ -1.39
CAPN3-210ENST00000561817 SNX32Q86XE0 403 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 TCAIMQ8N3R3 496 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 SYNPOQ8N3V7 929 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 CHCHD4Q8N4Q1 142 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 AFAP1L2Q8N4X5 818 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 OXR1Q8N573 874 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 OR4F6Q8NGB9 312 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 RP9Q8TA86 221 aaKnown RBP6.36□□□□□ -1.39
CAPN3-210ENST00000561817 ASB12Q8WXK4 309 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 CMTM5Q96DZ9 223 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 HIC2Q96JB3 615 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 MPP4Q96JB8 637 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 RAB3IPQ96QF0 476 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-210ENST00000561817 RTKNQ9BST9 563 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 LGR4Q9BXB1 951 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 ASPSCR1Q9BZE9 553 aa6.36□□□□□ -1.39
CAPN3-210ENST00000561817 ZCCHC2Q9C0B9 1178 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms