RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 FMO4P31512 558 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 SARNPP82979 210 aaKnown RBP16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 CCSMST1Q4G0I0 132 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 RNF187Q5TA31 235 aaPredicted RBP16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 CNSTQ6PJW8 725 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 GPR135Q8IZ08 494 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 GSDMBQ8TAX9 411 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 SEC14L1Q92503 715 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 BIRC8Q96P09 236 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 OSBPL9Q96SU4 736 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 SAMD15Q9P1V8 674 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 SNX7Q9UNH6 387 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 CRYL1Q9Y2S2 319 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 NEU2Q9Y3R4 380 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 SCN2AQ99250 2005 aa16.58■□□□□ 0.24
CDC42BPB-208ENST00000561271 SCN3AQ9NY46 2000 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 H3BMH7 237 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 RASGRF2O14827 1237 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 PHF2O75151 1096 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 RECKO95980 971 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 CAPN1P07384 714 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 PAMP19021 973 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 OGNP20774 298 aaKnown RBP16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 CD9P21926 228 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 PTGIRP43119 386 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 TLE1Q04724 770 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 NCF4Q15080 339 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 ZNF385CQ66K41 422 aaPredicted RBP16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 SDCCAG8Q86SQ7 713 aaPredicted RBP16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 OR2L8Q8NGY9 312 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 SERPINB12Q96P63 405 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 NAP1L3Q99457 506 aaPredicted RBP16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 NLNQ9BYT8 704 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 SPRTNQ9H040 489 aaPredicted RBP16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 EPN3Q9H201 632 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 IRAK4Q9NWZ3 460 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 TLK1Q9UKI8 766 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 TCFL5Q9UL49 500 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 SLC39A10Q9ULF5 831 aa16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 SPENQ96T58 3664 aaKnown RBP16.57■□□□□ 0.24
CDC42BPB-208ENST00000561271 CNTRLQ7Z7A1 2325 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 ARGFXA6NJG6 315 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 C9J4A7 227 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 MKRN2OSH3BPM6 223 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 KPNA5O15131 536 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 ZNF185O15231 689 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 ZSCAN9O15535 394 aaPredicted RBP16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 RAB40ALP0C0E4 278 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 PSMB5P28074 263 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 DHX34Q14147 1143 aaKnown RBP16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 C1orf189Q5VU69 101 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 ZNF470Q6ECI4 717 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 CENPUQ71F23 418 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 CILP2Q8IUL8 1156 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 APLFQ8IW19 511 aaPredicted RBP16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 AGGF1Q8N302 714 aaeCLIP16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 ZNF655Q8N720 491 aaPredicted RBP16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 ADAMTS17Q8TE56 1095 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 RAB11FIP5Q9BXF6 653 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 CHRNA10Q9GZZ6 450 aa16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 XAB2Q9HCS7 855 aaKnown RBP16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 TRMT1Q9NXH9 659 aaKnown RBP16.56■□□□□ 0.24
CDC42BPB-208ENST00000561271 FAM237BA0A1B0GVD1 139 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 ZSCAN12O43309 604 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 WISP1O95388 367 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 C1orf105O95561 183 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 S1PR4O95977 384 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 ESR1P03372 595 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 HBQ1P09105 142 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 CBSLP0DN79 551 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 MLNP12872 115 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 CBSP35520 551 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 SLC9A5Q14940 896 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 ANKRD20A4Q4UJ75 823 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 NEPROQ6NW34 567 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 SPNS2Q8IVW8 549 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 DNAJC22Q8N4W6 341 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 MCUQ8NE86 351 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 ACTRT1Q8TDG2 376 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 THAP4Q8WY91 577 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 RAD51AP1Q96B01 352 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 TCF12Q99081 682 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 GALPQ9UBC7 116 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 DHCR7Q9UBM7 475 aaKnown RBP16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 SNX12Q9UMY4 172 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 PLCL2Q9UPR0 1127 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 AP1M2Q9Y6Q5 423 aa16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 PRRC2CQ9Y520 2896 aaKnown RBP16.55■□□□□ 0.24
CDC42BPB-208ENST00000561271 GOLGA6L10A0A0M3HER8 536 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 SDR42E2A6NKP2 422 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 H3BMM5 538 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 PFDN6O15212 129 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 KIF5CO60282 957 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 PDGFAP04085 211 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 AGXTP21549 392 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 MAGEA3P43357 314 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 FNTAP49354 379 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 GBX1Q14549 363 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 ARMC3Q5W041 872 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms