RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 PKP4Q99569 1192 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 B3GNT4Q9C0J1 378 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 CCDC68Q9H2F9 335 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 AKIRIN1Q9H9L7 192 aaPredicted RBP13.43□□□□□ -0.26
TPM1-230ENST00000561266 CPNE5Q9HCH3 593 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 C1GALT1Q9NS00 363 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 OR6C2Q9NZP2 312 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 CCDC88CQ9P219 2028 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 KLHL42Q9P2K6 505 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 PILRAQ9UKJ1 303 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 BTRCQ9Y297 605 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 COMMD10Q9Y6G5 202 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 MDC1Q14676 2089 aaKnown RBP13.43□□□□□ -0.26
TPM1-230ENST00000561266 FAM159BA6NKW6 160 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 ISM1B1AKI9 464 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.42□□□□□ -0.26
TPM1-230ENST00000561266 GFYI3L273 518 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 POLR1CO15160 346 aaPredicted RBP13.42□□□□□ -0.26
TPM1-230ENST00000561266 VPS26AO75436 327 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 ZBTB11O95625 1053 aaPredicted RBP13.42□□□□□ -0.26
TPM1-230ENST00000561266 DLGAP3O95886 979 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 MPC1LP0DKB6 136 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 FGF5P12034 268 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 GABRA4P48169 554 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 HSD11B2P80365 405 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 CAV1Q03135 178 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 TUBB2AQ13885 445 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 ZNF460Q14592 562 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 ZXDCQ2QGD7 858 aaPredicted RBP13.42□□□□□ -0.26
TPM1-230ENST00000561266 PWWP2BQ6NUJ5 590 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 CDHR3Q6ZTQ4 885 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 C3orf62Q6ZUJ4 267 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 NEK10Q6ZWH5 1172 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 CEP97Q8IW35 865 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 PPFIBP2Q8ND30 876 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 RAD51AP1Q96B01 352 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 TUBB2BQ9BVA1 445 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 ZFATQ9P243 1243 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 MTO1Q9Y2Z2 717 aaKnown RBP13.42□□□□□ -0.26
TPM1-230ENST00000561266 VWA7Q9Y334 891 aa13.42□□□□□ -0.26
TPM1-230ENST00000561266 TMEM184BQ9Y519 407 aaPredicted RBP13.42□□□□□ -0.26
TPM1-230ENST00000561266 ZFYVE26Q68DK2 2539 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 MYO1CO00159 1063 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 NDC80O14777 642 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 RRP8O43159 456 aaKnown RBP13.41□□□□□ -0.26
TPM1-230ENST00000561266 SPAG6O75602 509 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 STK17BO94768 372 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 LIPCP11150 499 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 ERGP11308 486 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 RAB15P59190 212 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 TAS2R39P59534 338 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 TUBB3Q13509 450 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 CYP2A13Q16696 494 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 DEFB110Q30KQ9 67 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 KIAA1614Q5VZ46 1190 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 FCRL6Q6DN72 434 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 CEACAM20Q6UY09 585 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 MBOAT1Q6ZNC8 495 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 KMT5CQ86Y97 462 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 LRRC56Q8IYG6 542 aaPredicted RBP13.41□□□□□ -0.26
TPM1-230ENST00000561266 SLC38A9Q8NBW4 561 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 MNS1Q8NEH6 495 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 OR9A1PQ8NGU1 263 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 OR1L3Q8NH93 324 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 FBF1Q8TES7 1133 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 DPH1Q9BZG8 443 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 FGF21Q9NSA1 209 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 TAS2R13Q9NYV9 303 aa13.41□□□□□ -0.26
TPM1-230ENST00000561266 TRMT6Q9UJA5 497 aaKnown RBP13.41□□□□□ -0.26
TPM1-230ENST00000561266 LOC101059948A0A1B0GTJ6 334 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 FAM95CA0A1B0GW59 222 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 H3BMH7 237 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 MATN2O00339 956 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 RAD1O60671 282 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 KIAA0754O94854 1291 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 WISP3O95389 354 aaPredicted RBP13.4□□□□□ -0.26
TPM1-230ENST00000561266 RPN2P04844 631 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 SAT1P21673 171 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 KIR2DS3Q14952 304 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 PHKG1Q16816 387 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 SLC5A12Q1EHB4 618 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 TTLL9Q3SXZ7 439 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 KBTBD12Q3ZCT8 623 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 TMEM164Q5U3C3 297 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 FAM45BPQ6NSW5 357 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 SUSD1Q6UWL2 747 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 LRRC69Q6ZNQ3 347 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 CYS1Q717R9 158 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 SLC26A11Q86WA9 606 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 C19orf47Q8N9M1 422 aaKnown RBP13.4□□□□□ -0.26
TPM1-230ENST00000561266 GALNT6Q8NCL4 622 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 OR2A1Q8NGT9 310 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 FAM45AQ8TCE6 357 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 ANKRD49Q8WVL7 239 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 IFT81Q8WYA0 676 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 LINGO1Q96FE5 620 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 VPS39Q96JC1 886 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 FOPNLQ96NB1 174 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 ASPSCR1Q9BZE9 553 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 PHACTR1Q9C0D0 580 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms