RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 SATB2Q9UPW6 733 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 PSAT1Q9Y617 370 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 U3KQA8 63 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 PLXNA2O75051 1894 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 RALGAPA1Q6GYQ0 2036 aa10.38□□□□□ -0.75
TPM1-229ENST00000561242 ZFHX2Q9C0A1 2572 aaPredicted RBP10.37□□□□□ -0.75
TPM1-229ENST00000561242 ANKRD36A6QL64 1941 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 CEP192Q8TEP8 1941 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 TMEM8BA6NDV4 472 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 TRIM49D1C9J1S8 452 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 CLGNO14967 610 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 TP73O15350 636 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 PHGDHO43175 533 aaKnown RBP10.37□□□□□ -0.75
TPM1-229ENST00000561242 CDH16O75309 829 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 PIAS1O75925 651 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 KLK3P07288 261 aaPredicted RBP10.37□□□□□ -0.75
TPM1-229ENST00000561242 F7P08709 466 aaPredicted RBP10.37□□□□□ -0.75
TPM1-229ENST00000561242 HBQ1P09105 142 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 FAM153BP0C7A2 387 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 TPBGLP0DKB5 382 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 NEFHP12036 1026 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 COL6A2P12110 1019 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 ZNF37AP17032 561 aaPredicted RBP10.37□□□□□ -0.75
TPM1-229ENST00000561242 CXCR2P25025 360 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 CD82P27701 267 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 GABRB3P28472 473 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 VSNL1P62760 191 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 IL11RAQ14626 422 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 CYP2A13Q16696 494 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 SLC5A12Q1EHB4 618 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 FAM153CQ494X1 144 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 CDCP2Q5VXM1 449 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 SPESP1Q6UW49 350 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 PRSS42Q7Z5A4 293 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 C17orf64Q86WR6 236 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 PPP1R3BQ86XI6 285 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 RIBC1Q8N443 379 aaPredicted RBP10.37□□□□□ -0.75
TPM1-229ENST00000561242 SNX31Q8N9S9 440 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 TTC29Q8NA56 475 aaPredicted RBP10.37□□□□□ -0.75
TPM1-229ENST00000561242 ZSCAN1Q8NBB4 408 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 FBXO15Q8NCQ5 510 aaPredicted RBP10.37□□□□□ -0.75
TPM1-229ENST00000561242 PPP4R1Q8TF05 950 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 RSC1A1Q92681 617 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 ATP6V1E2Q96A05 226 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 ZUFSPQ96AP4 578 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 KIAA1143Q96AT1 154 aaPredicted RBP10.37□□□□□ -0.75
TPM1-229ENST00000561242 PRR11Q96HE9 360 aaPredicted RBP10.37□□□□□ -0.75
TPM1-229ENST00000561242 ZNF578Q96N58 590 aaPredicted RBP10.37□□□□□ -0.75
TPM1-229ENST00000561242 PKP4Q99569 1192 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 MAP3K3Q99759 626 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 EFHD1Q9BUP0 239 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 ROPN1BQ9BZX4 212 aaPredicted RBP10.37□□□□□ -0.75
TPM1-229ENST00000561242 ANKZF1Q9H8Y5 726 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 CAB39LQ9H9S4 337 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 ROPN1Q9HAT0 212 aaPredicted RBP10.37□□□□□ -0.75
TPM1-229ENST00000561242 FETUBQ9UGM5 382 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 CIDEBQ9UHD4 219 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 DCDC2Q9UHG0 476 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 MID2Q9UJV3 735 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 KLK13Q9UKR3 277 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 PCDHGA8Q9Y5G5 932 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 NFS1Q9Y697 457 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 KCNE2Q9Y6J6 123 aa10.37□□□□□ -0.75
TPM1-229ENST00000561242 PRAMEF33A0A0G2JMD5 474 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 NPEPPSL1A6NEC2 478 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 NCF1BA6NI72 391 aaPredicted RBP10.36□□□□□ -0.75
TPM1-229ENST00000561242 PRR19A6NJB7 356 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 SLC9B1P1A6NJY1 282 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 NCF1CA8MVU1 366 aaPredicted RBP10.36□□□□□ -0.75
TPM1-229ENST00000561242 B4E171 279 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 TXNDC9O14530 226 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 RGS16O15492 202 aaPredicted RBP10.36□□□□□ -0.75
TPM1-229ENST00000561242 FAM155BO75949 473 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 IPO13O94829 963 aaKnown RBP10.36□□□□□ -0.75
TPM1-229ENST00000561242 C2P06681 752 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 ANKRD34CP0C6C1 535 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 THRAP10827 490 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 PIM1P11309 404 aaPredicted RBP10.36□□□□□ -0.75
TPM1-229ENST00000561242 NCF1P14598 390 aaPredicted RBP10.36□□□□□ -0.75
TPM1-229ENST00000561242 HOXB3P14651 431 aaPredicted RBP10.36□□□□□ -0.75
TPM1-229ENST00000561242 TFEBP19484 476 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 SPINK2P20155 84 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 AGXTP21549 392 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 PKLRP30613 574 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 HPDP32754 393 aaPredicted RBP10.36□□□□□ -0.75
TPM1-229ENST00000561242 TSPAN7P41732 249 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 SLCO1A2P46721 670 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 ZFP36L1Q07352 338 aaKnown RBP10.36□□□□□ -0.75
TPM1-229ENST00000561242 TUBB3Q13509 450 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 NAE1Q13564 534 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 BMPR2Q13873 1038 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 EFTUD2Q15029 972 aaKnown RBP eCLIP10.36□□□□□ -0.751e-5■■■□□ 16.7
TPM1-229ENST00000561242 ACAP2Q15057 778 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 SULT1C3Q6IMI6 304 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 AGTRAPQ6RW13 159 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 MICALCLQ6ZW33 695 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 LCA5Q86VQ0 697 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 TMEM126BQ8IUX1 230 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 CLIP3Q96DZ5 547 aa10.36□□□□□ -0.75
TPM1-229ENST00000561242 OR6C1Q96RD1 312 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms