RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 PPP1R3BQ86XI6 285 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 CNTN4Q8IWV2 1026 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 SPACA3Q8IXA5 215 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 CPNE9Q8IYJ1 553 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 CACNA2D3Q8IZS8 1091 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 MYO1HQ8N1T3 1032 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 PPM1NQ8N819 430 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 OR9A1PQ8NGU1 263 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 OR2L8Q8NGY9 312 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 FAM45AQ8TCE6 357 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 MCOLN3Q8TDD5 553 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 EEF1AKMT1Q8WVE0 214 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 ALKBH8Q96BT7 664 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 KCTD12Q96CX2 325 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 MRRFQ96E11 262 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 RHOXF2Q9BQY4 288 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 WDR83Q9BRX9 315 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 RAB11FIP5Q9BXF6 653 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 TRIM54Q9BYV2 358 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 ULBP3Q9BZM4 244 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 B3GNT4Q9C0J1 378 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 TSPYL1Q9H0U9 437 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 FANCEQ9HB96 536 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 PLAC1Q9HBJ0 212 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 FGF21Q9NSA1 209 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 SPHK1Q9NYA1 384 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 KLHL42Q9P2K6 505 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 DMGDHQ9UI17 866 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 POMT2Q9UKY4 750 aa8.73□□□□□ -1.01
SNRPA1-214ENST00000560987 FAM95CA0A1B0GW59 222 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 KRT87PA6NCN2 255 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 ZNF839A8K0R7 811 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 PSIP1O75475 530 aaKnown RBP8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 SPAG6O75602 509 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 STK17BO94768 372 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 NTRK1P04629 796 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 HIST1H2AGP0C0S8 130 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 CCNYL3P0C7X3 344 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 LIPCP11150 499 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 ST6GAL1P15907 406 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 HIST1H2ADP20671 130 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 ATP5DP30049 168 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 PKLRP30613 574 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 PHBP35232 272 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 RPA3P35244 121 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 HSD17B2P37059 387 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 ATP1A2P50993 1020 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 FRG1Q14331 258 aaKnown RBP8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 GPR19Q15760 415 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 THEMIS2Q5TEJ8 643 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 FIGLAQ6QHK4 219 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 ZDHHC24Q6UX98 284 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 CYHR1Q6ZMK1 362 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 CCDC81Q6ZN84 652 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 TRIM73Q86UV7 250 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 BPHLQ86WA6 291 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 SLC26A11Q86WA9 606 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 TMEM126BQ8IUX1 230 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 FAM20CQ8IXL6 584 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 IFT20Q8IY31 132 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 SYTL1Q8IYJ3 562 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 CARFQ8N187 725 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 BMPERQ8N8U9 685 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 ZSCAN1Q8NBB4 408 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 CD200R1Q8TD46 325 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 FBF1Q8TES7 1133 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 ASB11Q8WXH4 323 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 PMEPA1Q969W9 287 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 LINGO1Q96FE5 620 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 TCTN2Q96GX1 697 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 VPS39Q96JC1 886 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 SLC41A2Q96JW4 573 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 HIST1H2AHQ96KK5 128 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 TRAPPC9Q96Q05 1148 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 OR2A14Q96R47 310 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 CCNL2Q96S94 520 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 HIST1H2AJQ99878 128 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 H2AFJQ9BTM1 129 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 LRRC4CQ9HCJ2 640 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 INTS7Q9NVH2 962 aaKnown RBP8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 CORO1CQ9ULV4 474 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 KLHL20Q9Y2M5 609 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 PCDHGA3Q9Y5H0 932 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 PSAT1Q9Y617 370 aa8.72□□□□□ -1.01
SNRPA1-214ENST00000560987 A0A0J9YY10 115 aa8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 TCRBV9S1A1TA0A576 114 aa8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 ARHGEF33A8MVX0 844 aa8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 CXorf49A8MYA2 514 aaPredicted RBP8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 TMEM150CB9EJG8 249 aa8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 RAD1O60671 282 aa8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 KIAA0754O94854 1291 aa8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 CYP2A7P20853 494 aa8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 OAS2P29728 719 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 CMPK1P30085 196 aa8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 STX2P32856 288 aa8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 SPRP35270 261 aaPredicted RBP8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 PGGT1BP53609 377 aa8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 PNLIPRP1P54315 467 aa8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 GPX6P59796 221 aa8.71□□□□□ -1.02
SNRPA1-214ENST00000560987 TUBB4BP68371 445 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms