RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 PDE5AO76074 875 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 CASP2P42575 452 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 GNPDA1P46926 289 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 PSME3P61289 254 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 CHIT1Q13231 466 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 ZNF423Q2M1K9 1284 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 RFTN2Q52LD8 501 aaPredicted RBP12.54□□□□□ -0.4
SNX1-211ENST00000560829 METRNLQ641Q3 311 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 DOK6Q6PKX4 331 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 RETREG3Q86VR2 466 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 MYLK4Q86YV6 388 aaPredicted RBP12.54□□□□□ -0.4
SNX1-211ENST00000560829 GALNT13Q8IUC8 556 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 RGL4Q8IZJ4 473 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 OR9A1PQ8NGU1 263 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 RPLP0P6Q8NHW5 317 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 PROKR1Q8TCW9 393 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 ZNF480Q8WV37 535 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 OR4K3Q96R72 315 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 CDRT15Q96T59 188 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 C1orf50Q9BV19 199 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 OSBPL6Q9BZF3 934 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 MMP17Q9ULZ9 603 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 SLC17A4Q9Y2C5 497 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 OR1A2Q9Y585 309 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 A0A1W2PP18 115 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 FAM234BA2RU67 622 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 NR5A2O00482 541 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 ANKRD28O15084 1053 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 NARSO43776 548 aaKnown RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 RSL1D1O76021 490 aaKnown RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 PSMG1O95456 288 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 PDYNP01213 254 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 PCSK2P16519 638 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 JAK1P23458 1154 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 IGFALSP35858 605 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 NME5P56597 212 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 IRF8Q02556 426 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 PLA2G4EQ3MJ16 856 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 IL23RQ5VWK5 629 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 TMEM92Q6UXU6 159 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 ZFAND4Q86XD8 727 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 LRRC56Q8IYG6 542 aaPredicted RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 SELENOMQ8WWX9 145 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 FAM3CQ92520 227 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 JADE3Q92613 823 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 STMN2Q93045 179 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 SPDL1Q96EA4 605 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 TEX37Q96LM6 180 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 SGPP1Q9BX95 441 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 ACPTQ9BZG2 426 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 ACTL8Q9H568 366 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 ELOVL6Q9H5J4 265 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 LRTM1Q9HBL6 345 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 C1orf109Q9NX04 203 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 MAP10Q9P2G4 905 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 NKX1-2Q9UD57 310 aaPredicted RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 ZNHIT2Q9UHR6 403 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 PRKAB1Q9Y478 270 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 TBC1D3DA0A087WVF3 549 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 TBC1D3IA0A087WXS9 549 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 TBC1D3EA0A087X179 549 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 TBC1D3KA0A087X1G2 549 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 TBC1D3FA6NER0 549 aaPredicted RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 TBC1D3LB9A6J9 549 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 H0YIV9 168 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 ANGPT2O15123 496 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 KCNJ13O60928 360 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 SORBS2O94875 1100 aaKnown RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 ASGR2P07307 311 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 HOXC4P09017 264 aaPredicted RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 TBC1D3HP0C7X1 549 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 G6PDP11413 515 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 SRFP11831 508 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 ACPPP15309 386 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 NDUFV2P19404 249 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 CD22P20273 847 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 HNF4AP41235 474 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 HALP42357 657 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 THOP1P52888 689 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 KCNK10P57789 538 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 UFM1P61960 85 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 HMGCS1Q01581 520 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 CEACAM7Q14002 265 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 KIAA0040Q15053 153 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 SMAD2Q15796 467 aaKnown RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 IMPG1Q17R60 797 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 VPS26BQ4G0F5 336 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 FRG2Q64ET8 278 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 TBC1D3GQ6DHY5 549 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 TBC1D3CQ6IPX1 549 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 GRHL2Q6ISB3 625 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 CAPN13Q6MZZ7 669 aaPredicted RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 CYP20A1Q6UW02 462 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 TBC1D3Q8IZP1 549 aaPredicted RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 DENND6BQ8NEG7 585 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 KLK6Q92876 244 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 RAD51AP1Q96B01 352 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 FRG2BQ96QU4 278 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 UHRF1Q96T88 793 aaPredicted RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 HOPXQ9BPY8 73 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms