RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 ACVR2AP27037 513 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 IL12BP29460 328 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 UGT1A3P35503 534 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 XKP51811 444 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 WDR4P57081 412 aaKnown RBP12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 C1QTNF8P60827 252 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 VLDLRP98155 873 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 RASGEF1AQ8N9B8 481 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 OR2AJ1Q8NGZ0 328 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 ING5Q8WYH8 240 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 SLC22A18Q96BI1 424 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 SNX27Q96L92 541 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 ANKHQ9HCJ1 492 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 TMEM9Q9P0T7 183 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 PXDNQ92626 1479 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 ADGRB1O14514 1584 aa12.95□□□□□ -0.34
CSPG4P11-201ENST00000560634 A0A1W2PRQ8 180 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 OR2AT4A6NND4 320 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 KLF11O14901 512 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 FFAR2O15552 330 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 TBX10O75333 385 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 NOGQ13253 232 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 RGMBQ6NW40 437 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 FUT10Q6P4F1 479 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 NUDT13Q86X67 352 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 ACDQ96AP0 544 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 LRRC58Q96CX6 371 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 CGREF1Q99674 301 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 HIPK3Q9H422 1215 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 TLE6Q9H808 572 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 PCDHGB5Q9Y5G0 923 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 RIC1Q4ADV7 1423 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 SCARB2Q14108 478 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 SPATS1Q496A3 300 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 ZNF676Q8N7Q3 588 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 GEMIN6Q8WXD5 167 aaKnown RBP12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 KLHL6Q8WZ60 621 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 VPS29Q9UBQ0 182 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 PCDHGB6Q9Y5F9 930 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 KANTRA0A1W2PQU2 76 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 TSPAN4O14817 238 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 PPEF2O14830 753 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 RASGRP1O95267 797 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 FECHP22830 423 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 EIF2S3P41091 472 aaKnown RBP12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 CEBPGP53567 150 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 CASP9P55211 416 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 CDKL1Q00532 357 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 CAP1Q01518 475 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 PITRM1Q5JRX3 1037 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 LGI4Q8N135 537 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 OR8H3Q8N146 312 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 SNIP1Q8TAD8 396 aaKnown RBP12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 COQ8BQ96D53 544 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 DCSTAMPQ9H295 470 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 HCN3Q9P1Z3 774 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 WDR37Q9Y2I8 494 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 LRRC42Q9Y546 428 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 FOXO6A8MYZ6 492 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 ENTPD6O75354 484 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 CKMT2P17540 419 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 SLC10A7Q0GE19 358 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 OR2T5Q6IEZ7 315 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 OR2T29Q8NH02 315 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 GPR151Q8TDV0 419 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 STON2Q8WXE9 905 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 MAPKAP1Q9BPZ7 522 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 EBF4Q9BQW3 602 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 USP29Q9HBJ7 922 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 OSER1Q9NX31 292 aa12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 RIMS1Q86UR5 1692 aaKnown RBP12.94□□□□□ -0.34
CSPG4P11-201ENST00000560634 ILVBLA1L0T0 632 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 CLIC1O00299 241 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 PLSCR1O15162 318 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 TMEM63AO94886 807 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 CREB1P16220 341 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 HOXC12P31275 282 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 PLA2G16P53816 162 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 ERVK-21P61565 698 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 MC1RQ01726 317 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 SYVN1Q86TM6 617 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 NAT8LQ8N9F0 302 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 CANT1Q8WVQ1 401 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 NR2E1Q9Y466 385 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 PCDHGB2Q9Y5G2 931 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 ALG5Q9Y673 324 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 C5orf51A6NDU8 294 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 CD72P21854 359 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 MAP3K8P41279 467 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 SLC15A1P46059 708 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 AVPR1BP47901 424 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 CLCNKBP51801 687 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 GAD2Q05329 585 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 XKR4Q5GH76 650 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 ATAT1Q5SQI0 421 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 PRAMEF17Q5VTA0 474 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 TNFAIP8L2Q6P589 184 aaPredicted RBP12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 ZDHHC24Q6UX98 284 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 PRR23CQ6ZRP0 262 aa12.93□□□□□ -0.34
CSPG4P11-201ENST00000560634 TMEM145Q8NBT3 493 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms