RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TTMPQ5BVD1 217 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 CPZQ66K79 652 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 DENND5AQ6IQ26 1287 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 ARHGEF18Q6ZSZ5 1173 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 LILRA3Q8N6C8 439 aaPredicted RBP13.15□□□□□ -0.3
SMAD3-214ENST00000560402 ADAMTS17Q8TE56 1095 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 SERPINB12Q96P63 405 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 C17orf62Q9BQA9 187 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 TRIM55Q9BYV6 548 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 ING2Q9H160 280 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 CHST8Q9H2A9 424 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 OR52A5Q9H2C5 316 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 CNOT10Q9H9A5 744 aaKnown RBP13.15□□□□□ -0.3
SMAD3-214ENST00000560402 ACTR5Q9H9F9 607 aaPredicted RBP13.15□□□□□ -0.3
SMAD3-214ENST00000560402 AKIRIN1Q9H9L7 192 aaPredicted RBP13.15□□□□□ -0.3
SMAD3-214ENST00000560402 MLXIPLQ9NP71 852 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 ZNF451Q9Y4E5 1061 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 USP9YO00507 2555 aaPredicted RBP13.15□□□□□ -0.3
SMAD3-214ENST00000560402 SPTBP11277 2137 aa13.15□□□□□ -0.3
SMAD3-214ENST00000560402 ARGFXA6NJG6 315 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 SLC9B1P1A6NJY1 282 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 TMEM150CB9EJG8 249 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 E7EVH7 732 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 BTN3A1O00481 513 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 LDB2O43679 373 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 VPS4BO75351 444 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 CEACAM4O75871 244 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 AP2A2O94973 939 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 ACSL3O95573 720 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 PDGFAP04085 211 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 ZSCAN5DPP0CG00 497 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 PRDX3P30048 256 aaKnown RBP13.14□□□□□ -0.31
SMAD3-214ENST00000560402 PREPP48147 710 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 MLLT10P55197 1068 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 OLIG2Q13516 323 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 DNAJC21Q5F1R6 531 aaKnown RBP13.14□□□□□ -0.31
SMAD3-214ENST00000560402 PLEKHS1Q5SXH7 462 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 FAM198BQ6UWH4 519 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 ZNF771Q7L3S4 317 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-214ENST00000560402 SERPINA9Q86WD7 417 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 SYTL1Q8IYJ3 562 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 CNPY4Q8N129 248 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 ENDOVQ8N8Q3 282 aaKnown RBP13.14□□□□□ -0.31
SMAD3-214ENST00000560402 GALNT11Q8NCW6 608 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 OR4E2Q8NGC2 313 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 OR52E1Q8NGJ3 308 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 OR2W6PQ8NHA6 318 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 CCDC110Q8TBZ0 833 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 ARL8AQ96BM9 186 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 CLIP3Q96DZ5 547 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 DNAJC1Q96KC8 554 aaKnown RBP13.14□□□□□ -0.31
SMAD3-214ENST00000560402 FERD3LQ96RJ6 166 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 DHRS4Q9BTZ2 278 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 SLC7A5P2Q9GIP4 190 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 C10orf88Q9H8K7 445 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 LRRC40Q9H9A6 602 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 PCMTD2Q9NV79 361 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 NLE1Q9NVX2 485 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-214ENST00000560402 NINJ2Q9NZG7 142 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 SERTAD3Q9UJW9 196 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 TCFL5Q9UL49 500 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 VPS4AQ9UN37 437 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 PADI2Q9Y2J8 665 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 NUP210LQ5VU65 1888 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 FER1L5A0AVI2 2057 aa13.14□□□□□ -0.31
SMAD3-214ENST00000560402 SPTAN1Q13813 2472 aaKnown RBP13.14□□□□□ -0.31
SMAD3-214ENST00000560402 PCM1Q15154 2024 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 SEC16AO15027 2179 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 TLDC2A0PJX2 215 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 C9J4A7 227 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 E7EQ34 232 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 LIN7AO14910 233 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-214ENST00000560402 DPM1O60762 260 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 TMEM63AO94886 807 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 ETS1P14921 441 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 ST6GAL1P15907 406 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 VARSP26640 1264 aaKnown RBP13.13□□□□□ -0.31
SMAD3-214ENST00000560402 FDFT1P37268 417 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 RRADP55042 308 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 GDF10P55107 478 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 ITGA1P56199 1179 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 TMPRSS15P98073 1019 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 CACNG1Q06432 222 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 PDIA2Q13087 525 aaKnown RBP13.13□□□□□ -0.31
SMAD3-214ENST00000560402 BOP1Q14137 746 aaKnown RBP13.13□□□□□ -0.31
SMAD3-214ENST00000560402 ITIH4Q14624 930 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 NCF4Q15080 339 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 PARP6Q2NL67 630 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 ZRANB3Q5FWF4 1079 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 ZNF789Q5FWF6 425 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 KCTD11Q693B1 232 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 MED25Q71SY5 747 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 AMIGO1Q86WK6 493 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 RAB43Q86YS6 212 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 TMEM102Q8N9M5 508 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-214ENST00000560402 SLC38A9Q8NBW4 561 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 OR1L3Q8NH93 324 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 CPT1CQ8TCG5 803 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 PYROXD1Q8WU10 500 aa13.13□□□□□ -0.31
SMAD3-214ENST00000560402 STYXQ8WUJ0 223 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms