RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	GPR180	Q86V85	440 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	C12orf40	Q86WS4	652 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	PTRH1	Q86Y79	214 aa	Known RBP	5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	HID1	Q8IV36	788 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	RIMKLA	Q8IXN7	391 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	STK40	Q8N2I9	435 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	CYGB	Q8WWM9	190 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	ACD	Q96AP0	544 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	SAMD11	Q96NU1	681 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	TSSK3	Q96PN8	268 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	CGREF1	Q99674	301 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	TCF25	Q9BQ70	676 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	CHID1	Q9BWS9	393 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	OSBPL11	Q9BXB4	747 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	TRIM54	Q9BYV2	358 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	RETREG1	Q9H6L5	497 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	SMURF2	Q9HAU4	748 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	CLK4	Q9HAZ1	481 aa	Known RBP	5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	PLGRKT	Q9HBL7	147 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	PNPLA3	Q9NST1	481 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	RIC8B	Q9NVN3	520 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	ARL15	Q9NXU5	204 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	ZIM2	Q9NZV7	527 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	PADI4	Q9UM07	663 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	SLC22A14	Q9Y267	594 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	COQ6	Q9Y2Z9	468 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	SH3GLB1	Q9Y371	365 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	ANGPTL3	Q9Y5C1	460 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	AQP12B	A6NM10	295 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369		J3QRK9	145 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	AXIN1	O15169	862 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	VPS4B	O75351	444 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	LEFTY1	O75610	366 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	LATS1	O95835	1130 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	OTC	P00480	354 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	S100B	P04271	92 aa	Predicted RBP	5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	MYCLP1	P12525	358 aa	Predicted RBP	5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	PRKACG	P22612	351 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	PSMA4	P25789	261 aa	Known RBP	5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	NFKBIA	P25963	317 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	AOAH	P28039	575 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	SHMT2	P34897	504 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	POLR2I	P36954	125 aa	Known RBP	5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	PPP3CC	P48454	512 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	SPINT3	P49223	89 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	CTSC	P53634	463 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	ABR	Q12979	859 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	ATP1A4	Q13733	1029 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	GRIN2C	Q14957	1233 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	LAPTM4A	Q15012	233 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	ADRM1	Q16186	407 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	PTCHD3	Q3KNS1	767 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	USP39	Q53GS9	565 aa	Known RBP	5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	CARD16	Q5EG05	197 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	FGD3	Q5JSP0	725 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	GRAMD4	Q6IC98	578 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	TTC33	Q6PID6	262 aa	Predicted RBP	5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	TMEM26	Q6ZUK4	368 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	SPRED1	Q7Z699	444 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	AQP12A	Q8IXF9	295 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	CPXM2	Q8N436	756 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	FIG4	Q92562	907 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	FBXL8	Q96CD0	374 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	RSPRY1	Q96DX4	576 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	ITCH	Q96J02	903 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	ZFYVE19	Q96K21	471 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	COPS8	Q99627	209 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	BARD1	Q99728	777 aa	Known RBP	5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	HTATIP2	Q9BUP3	242 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	ADI1	Q9BV57	179 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	SERHL	Q9NQF3	203 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	EXD2	Q9NVH0	621 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	ZDHHC3	Q9NYG2	299 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	AASS	Q9UDR5	926 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	ANAPC2	Q9UJX6	822 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	CNOT11	Q9UKZ1	510 aa	Known RBP	5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	HS3ST2	Q9Y278	367 aa		5.62	□□□□□ -1.51
LRRC49-223	ENST00000560369	KCNE1B	A0A087WTH5	132 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	RNF103-CHMP3	A0A140T963	221 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	ABHD14A-ACY1	A0A1B0GW23	586 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	OTOL1	A6NHN0	477 aa	Predicted RBP	5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369		K7ESM1	405 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	PFDN6	O15212	129 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	NOBOX	O60393	691 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	SOCS5	O75159	536 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	ULK1	O75385	1050 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	STK16	O75716	305 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	WDR47	O94967	919 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	ETHE1	O95571	254 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	ENO2	P09104	434 aa	Predicted RBP	5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	PABPC1	P11940	636 aa	Known RBP	5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	FAS	P25445	335 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	ELK4	P28324	431 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	PDHA2	P29803	388 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	PBLD	P30039	288 aa	Predicted RBP	5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	AKT1	P31749	480 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	RGS4	P49798	205 aa		5.61	□□□□□ -1.51
LRRC49-223	ENST00000560369	CLCN2	P51788	898 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms