RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 EFNA1P20827 205 aaPredicted RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 NR4A1P22736 598 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 HRH2P25021 359 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 PTPN3P26045 913 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 IFNA8P32881 189 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 NR4A2P43354 598 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 HTR3AP46098 478 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 GNPDA1P46926 289 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 CLCNKBP51801 687 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 MAPK10P53779 464 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 OAZ1P54368 228 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 UGT2B15P54855 530 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC12A2P55011 1212 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 CDH13P55290 713 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 SOX10P56693 466 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 SCAND1P57086 179 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 KCNK10P57789 538 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 RPS6P62753 249 aaKnown RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC35A2P78381 396 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 MRPS15P82914 257 aaKnown RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 TFAMQ00059 246 aaKnown RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 TEKQ02763 1124 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 EMX1Q04741 257 aaPredicted RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 TARDBPQ13148 414 aaKnown RBP eCLIP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 MXD4Q14582 209 aaPredicted RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 STARD3Q14849 445 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 CLCA4Q14CN2 919 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 NPTX1Q15818 432 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 GOLGA7BQ2TAP0 167 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 CTU2Q2VPK5 515 aaKnown RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 UGT3A2Q3SY77 523 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 CCDC58Q4VC31 144 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 YIF1BQ5BJH7 314 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 DACT2Q5SW24 774 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF678Q5SXM1 525 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 ATAD3CQ5T2N8 411 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 FKBP1CQ5VVH2 108 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 KANK2Q63ZY3 851 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 STEAP3Q658P3 488 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 TIGD3Q6B0B8 471 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 FAAH2Q6GMR7 532 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 SULT1C3Q6IMI6 304 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 LAYNQ6UX15 382 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 CCBE1Q6UXH8 406 aaPredicted RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF767PQ75MW2 155 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 CHST15Q7LFX5 561 aaPredicted RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 OVCH1Q7RTY7 1134 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 PID1Q7Z2X4 250 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 BNIPLQ7Z465 357 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 SAPCD2Q86UD0 394 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 PLCZ1Q86YW0 608 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC41A1Q8IVJ1 513 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 EID3Q8N140 333 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 ARMC10Q8N2F6 343 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 CLIP4Q8N3C7 705 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 FAM109AQ8N4B1 249 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 TMEM199Q8N511 208 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 PAF1Q8N7H5 531 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 LSMEM1Q8N8F7 131 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 DNAAF3Q8N9W5 541 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 CLRN3Q8NCR9 226 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 PPHLN1Q8NEY8 458 aaKnown RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 FLCNQ8NFG4 579 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 OR8J3Q8NGG0 315 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 PSMA8Q8TAA3 256 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 NDNFQ8TB73 568 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 FAM110BQ8TC76 370 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 RNF139Q8WU17 664 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC35F5Q8WV83 523 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 FAM151AQ8WW52 585 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 SEPT1Q8WYJ6 367 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC38A4Q969I6 547 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 NTAN1Q96AB6 310 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 ISG20Q96AZ6 181 aaKnown RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 LGALS12Q96DT0 336 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 CLIP3Q96DZ5 547 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 ZHX1-C8orf76Q96EF9 292 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 HEXIM2Q96MH2 286 aaKnown RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 TSGA13Q96PP4 275 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 IL12RB2Q99665 862 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 DGCR6LQ9BY27 220 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 PRDM12Q9H4Q4 367 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 RPAP3Q9H6T3 665 aaPredicted RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 SYNDIG1Q9H7V2 258 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 RPF1Q9H9Y2 349 aaKnown RBP5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 PLEKHA5Q9HAU0 1116 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 POPDC3Q9HBV1 291 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 PTPRHQ9HD43 1115 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF302Q9NR11 478 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 CHRAC1Q9NRG0 131 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 NRBP2Q9NSY0 501 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 AIG1Q9NVV5 245 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 CLDND1Q9NY35 253 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 OPTCQ9UBM4 332 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 SIX4Q9UIU6 781 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 NUP50Q9UKX7 468 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 TCFL5Q9UL49 500 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 AFG3L2Q9Y4W6 797 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 HES2Q9Y543 173 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms