RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 FAAH2Q6GMR7 532 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 BRIX1Q8TDN6 353 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 TFGQ92734 400 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 C8orf44Q96CB5 159 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 VPS50Q96JG6 964 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 ASB8Q9H765 288 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 FKBPLQ9UIM3 349 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 NXT1Q9UKK6 140 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 ARL5AQ9Y689 179 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 AGAP14A8MT82 685 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 DSCR3O14972 297 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 PPP1R12AO14974 1030 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 USP1O94782 785 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 PROSCO94903 275 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 PRR35P0CG20 571 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 TPBGLP0DKB5 382 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 PEBP1P30086 187 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 SHMT2P34897 504 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 OR1D4P47884 311 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 ARSFP54793 590 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 NCCRP1Q6ZVX7 275 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 MCATQ8IVS2 390 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 KBTBD2Q8IY47 623 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 DTWD1Q8N5C7 304 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 SIRT6Q8N6T7 355 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 OR5AR1Q8NGP9 310 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 CCDC110Q8TBZ0 833 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 SYN2Q92777 582 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 DCUN1D1Q96GG9 259 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 OXNAD1Q96HP4 312 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 DNAJC7Q99615 494 aa12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 TREX2Q9BQ50 279 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.26□□□□□ -0.45
RABGGTA-213ENST00000560127 COL6A5A8TX70 2615 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 ZNF407Q9C0G0 2248 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 C3orf70A6NLC5 250 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 MAP2K7O14733 419 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 WDPCPO95876 746 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 RALBP11234 206 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 ATP1B2P14415 290 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 ACPPP15309 386 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 NFKB1P19838 968 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 MCM3P25205 808 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 XIAPP98170 497 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 PMP22Q01453 160 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 WASHC5Q12768 1159 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 ASTE1Q2TB18 679 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 ATG9BQ674R7 924 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 MEX3BQ6ZN04 569 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 METTL27Q8N6F8 245 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 OR4K2Q8NGD2 314 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 TMEM121Q9BTD3 319 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 CRB3Q9BUF7 120 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 CUTCQ9NTM9 273 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 CRLS1Q9UJA2 301 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 KLHL20Q9Y2M5 609 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 ZNF835Q9Y2P0 537 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 MEMO1Q9Y316 297 aa12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 MRPS2Q9Y399 296 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-213ENST00000560127 A0A087X0T9 212 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 LRRD1A4D1F6 860 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 APOL1O14791 398 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 MFAP3LO75121 409 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 CELA2AP08217 269 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 FAM228BP0C875 321 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 COX6A1P12074 109 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 MAGP20916 626 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 CARSP49589 748 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 KLC1Q07866 573 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 RPA4Q13156 261 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 Q6ZPB1 254 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 IPMKQ8NFU5 416 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 DENND1AQ8TEH3 1009 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 PHF3Q92576 2039 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 COPS8Q99627 209 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 FAM96AQ9H5X1 160 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 OR6C2Q9NZP2 312 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 PLAGL1Q9UM63 463 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 LUC7L2Q9Y383 392 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 TLN2Q9Y4G6 2542 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 MAU2Q9Y6X3 613 aa12.24□□□□□ -0.45
RABGGTA-213ENST00000560127 FN1P02751 2386 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 NSG1A0A0A6YYJ2 146 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 ISM1B1AKI9 464 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 ZNF487B1APH4 448 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 FANCGO15287 622 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 CBFA2T2O43439 604 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 PRAMEF2O60811 474 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 FAM155BO75949 473 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 BMP10O95393 424 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 MED26O95402 600 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 SERPING1P05155 500 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 SERPINA7P05543 415 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 FDXRP22570 491 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 ACADLP28330 430 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 NSG1P42857 185 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 TNNT3P45378 269 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 KIR2DS3Q14952 304 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 TAF1AQ15573 450 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms