RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 RAD51AP1Q96B01 352 aa10.54□□□□□ -0.72
TPM1-217ENST00000559108 RNF31Q96EP0 1072 aa10.54□□□□□ -0.72
TPM1-217ENST00000559108 TSPAN17Q96FV3 270 aa10.54□□□□□ -0.72
TPM1-217ENST00000559108 PRR11Q96HE9 360 aaPredicted RBP10.54□□□□□ -0.72
TPM1-217ENST00000559108 SCNM1Q9BWG6 230 aa10.54□□□□□ -0.72
TPM1-217ENST00000559108 RAB33BQ9H082 229 aa10.54□□□□□ -0.72
TPM1-217ENST00000559108 SRMSQ9H3Y6 488 aa10.54□□□□□ -0.72
TPM1-217ENST00000559108 STN1Q9H668 368 aaKnown RBP10.54□□□□□ -0.72
TPM1-217ENST00000559108 ACTR10Q9NZ32 417 aa10.54□□□□□ -0.72
TPM1-217ENST00000559108 STOX2Q9P2F5 926 aaPredicted RBP10.54□□□□□ -0.72
TPM1-217ENST00000559108 PSMC3IPQ9P2W1 217 aaPredicted RBP10.54□□□□□ -0.72
TPM1-217ENST00000559108 EPHA6Q9UF33 1036 aa10.54□□□□□ -0.72
TPM1-217ENST00000559108 POLG2Q9UHN1 485 aa10.54□□□□□ -0.72
TPM1-217ENST00000559108 CLCA2Q9UQC9 943 aa10.54□□□□□ -0.72
TPM1-217ENST00000559108 FER1L5A0AVI2 2057 aa10.54□□□□□ -0.72
TPM1-217ENST00000559108 WDFY3Q8IZQ1 3526 aa10.54□□□□□ -0.72
TPM1-217ENST00000559108 IGKV1-8A0A0C4DH67 115 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 E7ENX8 843 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 SLC16A5O15375 505 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 TAPBPO15533 448 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 SYF2O95926 243 aaKnown RBP10.53□□□□□ -0.72
TPM1-217ENST00000559108 CATP04040 527 aaKnown RBP10.53□□□□□ -0.72
TPM1-217ENST00000559108 C8GP07360 202 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 SNRPAP09012 282 aaKnown RBP10.53□□□□□ -0.72
TPM1-217ENST00000559108 SPTBP11277 2137 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 CCL4P13236 92 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 MTHFD2P13995 350 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 ST6GAL1P15907 406 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 H2AFXP16104 143 aaPredicted RBP10.53□□□□□ -0.72
TPM1-217ENST00000559108 CREB1P16220 341 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 AMD1P17707 334 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 TFEBP19484 476 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 ITIH1P19827 911 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 TYK2P29597 1187 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 PRDX3P30048 256 aaKnown RBP10.53□□□□□ -0.72
TPM1-217ENST00000559108 CCKBRP32239 447 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 SHMT2P34897 504 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 RGS4P49798 205 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 SERPINB9P50453 376 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 INHBCP55103 352 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 SH3BP2P78314 561 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 TAP2Q03519 686 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 SP140Q13342 867 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 KCNAB1Q14722 419 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 TIFABQ6ZNK6 161 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 TDRPQ86YL5 185 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 NKAPQ8N5F7 415 aaKnown RBP10.53□□□□□ -0.72
TPM1-217ENST00000559108 BMPERQ8N8U9 685 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 OR2A1Q8NGT9 310 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 HMGCLL1Q8TB92 370 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 ZIM3Q96PE6 472 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 OR4K3Q96R72 315 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 ATOH8Q96SQ7 321 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 TMEM79Q9BSE2 394 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 TMEM121BQ9BXQ6 578 aaPredicted RBP10.53□□□□□ -0.72
TPM1-217ENST00000559108 PITPNM3Q9BZ71 974 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 VPS11Q9H270 941 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 C12orf65Q9H3J6 166 aaKnown RBP10.53□□□□□ -0.72
TPM1-217ENST00000559108 ALG9Q9H6U8 611 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 PARVBQ9HBI1 364 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 SYTL2Q9HCH5 934 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 FAM60AQ9NP50 221 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 SLC6A20Q9NP91 592 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 PCMTD2Q9NV79 361 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 OCIAD1Q9NX40 245 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 SIDT1Q9NXL6 827 aaKnown RBP10.53□□□□□ -0.72
TPM1-217ENST00000559108 SEMA5BQ9P283 1151 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 EMCNQ9ULC0 261 aa10.53□□□□□ -0.72
TPM1-217ENST00000559108 SDK2Q58EX2 2172 aa10.52□□□□□ -0.72
TPM1-217ENST00000559108 KNTC1P50748 2209 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 GSAPA4D1B5 854 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 CCDC151A5D8V7 595 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 FAM221BA6H8Z2 402 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 LRRC14BA6NHZ5 514 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 KRT38O76015 456 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 GUCA1CO95843 209 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 LTA4HP09960 611 aaKnown RBP10.52□□□□□ -0.73
TPM1-217ENST00000559108 CRABP2P29373 138 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 CCNFP41002 786 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 GABRA4P48169 554 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 SEPHS1P49903 392 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 PNLIPRP1P54315 467 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 SLC12A2P55011 1212 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 TBPL1P62380 186 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 RASA2Q15283 850 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 TECRLQ5HYJ1 363 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 PHF19Q5T6S3 580 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 KIAA1614Q5VZ46 1190 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 LRRC8EQ6NSJ5 796 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 C16orf46Q6P387 395 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 AGTRAPQ6RW13 159 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 RAPH1Q70E73 1250 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 PRSS42Q7Z5A4 293 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 OOSP2Q86WS3 158 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 TMPRSS12Q86WS5 348 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 EXT2Q93063 718 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 KIAA1191Q96A73 305 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 ESAMQ96AP7 390 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 PYCR2Q96C36 320 aa10.52□□□□□ -0.73
TPM1-217ENST00000559108 AHCYL2Q96HN2 611 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms