RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 IGKV1-8A0A0C4DH67 115 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 NPEPPSL1A6NEC2 478 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 TLCD2A6NGC4 264 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 PLD2O14939 933 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 SLC16A8O95907 504 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 APC2O95996 2303 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 CTSBP07858 339 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 IMPA1P29218 277 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 KCNC1P48547 511 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 SEPHS1P49903 392 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 IRF9Q00978 393 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 FOXK2Q01167 660 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 PDAP1Q13442 181 aaKnown RBP11.05□□□□□ -0.64
SNX1-204ENST00000559061 SLC29A2Q14542 456 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 SLMAPQ14BN4 828 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 PCM1Q15154 2024 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 CACHD1Q5VU97 1274 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 WDR93Q6P2C0 686 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 SPESP1Q6UW49 350 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 CEP128Q6ZU80 1094 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 UBE2R2Q712K3 238 aaPredicted RBP11.05□□□□□ -0.64
SNX1-204ENST00000559061 CLEC14AQ86T13 490 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 CENPLQ8N0S6 344 aaPredicted RBP11.05□□□□□ -0.64
SNX1-204ENST00000559061 PPFIBP2Q8ND30 876 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 OR9A1PQ8NGU1 263 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 WDR36Q8NI36 951 aaKnown RBP11.05□□□□□ -0.64
SNX1-204ENST00000559061 GABPB2Q8TAK5 448 aaPredicted RBP11.05□□□□□ -0.64
SNX1-204ENST00000559061 MZB1Q8WU39 189 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 ZNF480Q8WV37 535 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 SKA2Q8WVK7 121 aaPredicted RBP11.05□□□□□ -0.64
SNX1-204ENST00000559061 RNF31Q96EP0 1072 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 SLC46A1Q96NT5 459 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 TRAPPC9Q96Q05 1148 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 SLC12A9Q9BXP2 914 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 TSPYL1Q9H0U9 437 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 FAM60AQ9NP50 221 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 IGSF5Q9NSI5 407 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 EURLQ9NYK6 297 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.05□□□□□ -0.64
SNX1-204ENST00000559061 DKK4Q9UBT3 224 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 PISDQ9UG56 409 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 RAB21Q9UL25 225 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 KLHL20Q9Y2M5 609 aa11.05□□□□□ -0.64
SNX1-204ENST00000559061 LAMA5O15230 3695 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 CFAP47Q6ZTR5 3102 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 A0A087WUV0 522 aaPredicted RBP11.04□□□□□ -0.64
SNX1-204ENST00000559061 PIPSLA2A3N6 862 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 GSAPA4D1B5 854 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 SLC9B1P1A6NJY1 282 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 EFCAB7A8K855 629 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 E7ENX8 843 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 H3BMH7 237 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 TOX3O15405 576 aaPredicted RBP11.04□□□□□ -0.64
SNX1-204ENST00000559061 ZBTB14O43829 449 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 TIAF1O95411 115 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 EBLN1P0CF75 366 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 SPTBP11277 2137 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 FOLR1P15328 257 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 CD1DP15813 335 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 NELFEP18615 380 aaKnown RBP11.04□□□□□ -0.64
SNX1-204ENST00000559061 CCNFP41002 786 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 IL2P60568 153 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 RAB10P61026 200 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 TAP2Q03519 686 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 SP140Q13342 867 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 USP10Q14694 798 aaKnown RBP11.04□□□□□ -0.64
SNX1-204ENST00000559061 OR4D1Q15615 310 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 MROH9Q5TGP6 573 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 KIAA1614Q5VZ46 1190 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 FCRL6Q6DN72 434 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 UGT3A1Q6NUS8 523 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 D2HGDHQ8N465 521 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 FBXO39Q8N4B4 442 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 OR2A1Q8NGT9 310 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 RAD51AP1Q96B01 352 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 NXPE2Q96DL1 559 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 ZDHHC12Q96GR4 267 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 CNTNAP3BQ96NU0 1288 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 GPR78Q96P69 363 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 CD180Q99467 661 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 PARD6BQ9BYG5 372 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 CNTNAP3Q9BZ76 1288 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 SPRY4Q9C004 299 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 STRADBQ9C0K7 418 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 GPAMQ9HCL2 828 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 SLC6A20Q9NP91 592 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 SNX15Q9NRS6 342 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 SPATA7Q9P0W8 599 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 STOX2Q9P2F5 926 aaPredicted RBP11.04□□□□□ -0.64
SNX1-204ENST00000559061 CTNNAL1Q9UBT7 734 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 BTRCQ9Y297 605 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 MAP1BP46821 2468 aaKnown RBP11.04□□□□□ -0.64
SNX1-204ENST00000559061 ZZEF1O43149 2961 aa11.04□□□□□ -0.64
SNX1-204ENST00000559061 FOXO6A8MYZ6 492 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 C2orf74A8MZ97 194 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 B4E171 279 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 SLC16A5O15375 505 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 ZW10O43264 779 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 TNFSF15O95150 251 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 CATP04040 527 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms