RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 NR1D2Q14995 579 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 ZNF648Q5T619 568 aaPredicted RBP10.07□□□□□ -0.8
TPM1-212ENST00000558347 C16orf46Q6P387 395 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 RIPOR1Q6ZS17 1223 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 ZCCHC23Q6ZST2 131 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 ZNF438Q7Z4V0 828 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 CLEC14AQ86T13 490 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 GALNT13Q8IUC8 556 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 C10orf107Q8IVU9 208 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 ZNF248Q8NDW4 579 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 GABPB2Q8TAK5 448 aaPredicted RBP10.07□□□□□ -0.8
TPM1-212ENST00000558347 CALML6Q8TD86 181 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 LIN37Q96GY3 246 aaPredicted RBP10.07□□□□□ -0.8
TPM1-212ENST00000558347 NR1H4Q96RI1 486 aaPredicted RBP10.07□□□□□ -0.8
TPM1-212ENST00000558347 ZNF184Q99676 751 aaPredicted RBP10.07□□□□□ -0.8
TPM1-212ENST00000558347 FAM167BQ9BTA0 163 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 ZNF395Q9H8N7 513 aaPredicted RBP10.07□□□□□ -0.8
TPM1-212ENST00000558347 THSD1Q9NS62 852 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 C20orf96Q9NUD7 363 aaPredicted RBP10.07□□□□□ -0.8
TPM1-212ENST00000558347 IL17CQ9P0M4 197 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 MARCOQ9UEW3 520 aaPredicted RBP10.07□□□□□ -0.8
TPM1-212ENST00000558347 PCDHGA8Q9Y5G5 932 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 PSAT1Q9Y617 370 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 ARL5AQ9Y689 179 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 UNC13CQ8NB66 2214 aa10.07□□□□□ -0.8
TPM1-212ENST00000558347 RHPN2P1A8MT19 583 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 CDRT15L2A8MXV6 281 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 AGRPO00253 132 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 ZNF195O14628 629 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 PPM1DO15297 605 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 SNUPNO95149 360 aaKnown RBP10.06□□□□□ -0.8
TPM1-212ENST00000558347 ERVK-10P10266 1014 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 BPIP17213 487 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 RBMS1P29558 406 aaKnown RBP10.06□□□□□ -0.8
TPM1-212ENST00000558347 CCKBRP32239 447 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 UGT1A5P35504 534 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 CPA2P48052 419 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 ARSDP51689 593 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 XIAPP98170 497 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 ZFP36L1Q07352 338 aaKnown RBP10.06□□□□□ -0.8
TPM1-212ENST00000558347 ILF2Q12905 390 aaKnown RBP10.06□□□□□ -0.8
TPM1-212ENST00000558347 AMZ1Q400G9 498 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 HSP90AA5PQ58FG0 334 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 C1orf146Q5VVC0 180 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 NEPROQ6NW34 567 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 RAB11FIP2Q7L804 512 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 CHST15Q7LFX5 561 aaPredicted RBP10.06□□□□□ -0.8
TPM1-212ENST00000558347 GALNT7Q86SF2 657 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 SLITRK4Q8IW52 837 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 OR4K2Q8NGD2 314 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 OR13C4Q8NGS5 318 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 GPR150Q8NGU9 434 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 ACTRT2Q8TDY3 377 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 NRG4Q8WWG1 115 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 DNAJC1Q96KC8 554 aaKnown RBP10.06□□□□□ -0.8
TPM1-212ENST00000558347 PANX3Q96QZ0 392 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 EBF4Q9BQW3 602 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 MCMBPQ9BTE3 642 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 THTPAQ9BU02 230 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 SPATA16Q9BXB7 569 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 GPR63Q9BZJ6 419 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 VCX3BQ9H321 246 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 PRORYQ9H606 182 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 RDH14Q9HBH5 336 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 NDE1Q9NXR1 346 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 TMEM216Q9P0N5 145 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 ATXN10Q9UBB4 475 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 NFKBIL1Q9UBC1 381 aaPredicted RBP10.06□□□□□ -0.8
TPM1-212ENST00000558347 SLC7A8Q9UHI5 535 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 ZNHIT2Q9UHR6 403 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 KCNK6Q9Y257 313 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 KCTD3Q9Y597 815 aa10.06□□□□□ -0.8
TPM1-212ENST00000558347 ATMQ13315 3056 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 ZNF106Q9H2Y7 1883 aaKnown RBP10.05□□□□□ -0.8
TPM1-212ENST00000558347 TRBV23OR9-2A0A075B6M9 112 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 A0A088AWK7 358 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 CCDC78A2IDD5 438 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 SLCO1B7G3V0H7 640 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 PLD2O14939 933 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 STX7O15400 261 aaKnown RBP10.05□□□□□ -0.8
TPM1-212ENST00000558347 NUAK1O60285 661 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 LYPLA1O75608 230 aaPredicted RBP10.05□□□□□ -0.8
TPM1-212ENST00000558347 TNFSF15O95150 251 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 COL6A2P12110 1019 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 ZNF8P17098 575 aaPredicted RBP10.05□□□□□ -0.8
TPM1-212ENST00000558347 ALDH4A1P30038 563 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 ADSLP30566 484 aaPredicted RBP10.05□□□□□ -0.8
TPM1-212ENST00000558347 CSRP3P50461 194 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 SESN3P58005 492 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 DCDC1P59894 354 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 PRAMEP78395 509 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 LRP8Q14114 963 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 UBAP2LQ14157 1087 aaKnown RBP10.05□□□□□ -0.8
TPM1-212ENST00000558347 PGM2L1Q6PCE3 622 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 EPGNQ6UW88 154 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 KIAA0408Q6ZU52 694 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 MAVSQ7Z434 540 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 STRA8Q7Z7C7 330 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 SFRP1Q8N474 314 aa10.05□□□□□ -0.8
TPM1-212ENST00000558347 FBXO39Q8N4B4 442 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms