RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 STARD8Q92502 1023 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 GTF2H4Q92759 462 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 BHMTQ93088 406 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 TIFAQ96CG3 184 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 ITCHQ96J02 903 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 LMLNQ96KR4 655 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 PPM1MQ96MI6 270 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 RNF145Q96MT1 663 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 CHID1Q9BWS9 393 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 SLC12A9Q9BXP2 914 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 ELOVL6Q9H5J4 265 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 PARVBQ9HBI1 364 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 ARL15Q9NXU5 204 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 NFKBIL1Q9UBC1 381 aaPredicted RBP7.1□□□□□ -1.27
VPS13C-206ENST00000558338 ZMYM5Q9UJ78 669 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 MAPRE3Q9UPY8 281 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 FADS3Q9Y5Q0 445 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 CEPT1Q9Y6K0 416 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 PLXNB3Q9ULL4 1909 aa7.1□□□□□ -1.27
VPS13C-206ENST00000558338 A0A096LPI6 279 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 A0A0U1RQS6 177 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 ELOVL7A1L3X0 281 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 FAM149AA5PLN7 773 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 C16orf96A6NNT2 1141 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 LOC730098B7Z3J9 87 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 WASH3PC4AMC7 463 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 PDLIM1O00151 329 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 DLGAP1O14490 977 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 FFAR3O14843 346 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 GPR42O15529 346 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 TGM5O43548 720 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 UGDHO60701 494 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 PRSS23O95084 383 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 FTH1P02794 183 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 C8AP07357 584 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 RETP07949 1114 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 CCL5P13501 91 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 CDH2P19022 906 aaPredicted RBP7.09□□□□□ -1.27
VPS13C-206ENST00000558338 AOAHP28039 575 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 CA8P35219 290 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 SPINT3P49223 89 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 ALDH3A2P51648 485 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 SEC13P55735 322 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 CLDN8P56748 225 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 MTPNP58546 118 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 RPS14P62263 151 aaKnown RBP7.09□□□□□ -1.27
VPS13C-206ENST00000558338 ZXDBP98169 803 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 DAG1Q14118 895 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 BOP1Q14137 746 aaKnown RBP7.09□□□□□ -1.27
VPS13C-206ENST00000558338 MYBPC3Q14896 1274 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 FAM174BQ3ZCQ3 159 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 USP39Q53GS9 565 aaKnown RBP7.09□□□□□ -1.27
VPS13C-206ENST00000558338 ARHGAP15Q53QZ3 475 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 ELMSAN1Q6PJG2 1045 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 LPCAT2Q7L5N7 544 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 TSPAN33Q86UF1 283 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 ZSWIM9Q86XI8 627 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 DTWD1Q8N5C7 304 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 L3MBTL4Q8NA19 623 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 ZNF548Q8NEK5 533 aaPredicted RBP7.09□□□□□ -1.27
VPS13C-206ENST00000558338 CSGALNACT1Q8TDX6 532 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 SELENOMQ8WWX9 145 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 AUTS2Q8WXX7 1259 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 FAM162AQ96A26 154 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 TESCQ96BS2 214 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 CMTM7Q96FZ5 175 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 HIC2Q96JB3 615 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 YME1L1Q96TA2 773 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 SEPHS2Q99611 448 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 KCNH6Q9H252 994 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 ZDHHC6Q9H6R6 413 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 TMEM39AQ9NV64 488 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 SLAMF8Q9P0V8 285 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 DNAJB9Q9UBS3 223 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 INTS6Q9UL03 887 aaKnown RBP7.09□□□□□ -1.27
VPS13C-206ENST00000558338 MAN2B2Q9Y2E5 1009 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 DNAH12Q6ZR08 3092 aa7.09□□□□□ -1.27
VPS13C-206ENST00000558338 ZFC3H1O60293 1989 aaKnown RBP7.09□□□□□ -1.27
VPS13C-206ENST00000558338 MYOCOSA0A1B0GUC4 107 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 RECQL5O94762 991 aaPredicted RBP7.09□□□□□ -1.28
VPS13C-206ENST00000558338 ASLP04424 464 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 CLTBP09497 229 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 C1SP09871 688 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 PABPC1P11940 636 aaKnown RBP7.09□□□□□ -1.28
VPS13C-206ENST00000558338 BCKDHAP12694 445 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 ATP1B2P14415 290 aaPredicted RBP7.09□□□□□ -1.28
VPS13C-206ENST00000558338 GKP32189 559 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 VIPR1P32241 457 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 S100A3P33764 101 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 SLC6A12P48065 614 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 NRIP1P48552 1158 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 DGKQP52824 942 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 ARSFP54793 590 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 WDR5P61964 334 aaKnown RBP7.09□□□□□ -1.28
VPS13C-206ENST00000558338 PTSQ03393 145 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 CSTF3Q12996 717 aaKnown RBP7.09□□□□□ -1.28
VPS13C-206ENST00000558338 PTGR1Q14914 329 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 C11orf91Q3C1V1 193 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 ZBED5Q49AG3 693 aa7.09□□□□□ -1.28
VPS13C-206ENST00000558338 ATP13A5Q4VNC0 1218 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms