RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 AADACL4Q5VUY2 407 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 GARNL3Q5VVW2 1013 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 CHADLQ6NUI6 762 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 CAND1Q86VP6 1230 aaKnown RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 OR6K6Q8NGW6 343 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 SCAMP5Q8TAC9 235 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 SLC39A8Q9C0K1 460 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 EIF2B4Q9UI10 523 aaKnown RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 CPQQ9Y646 472 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 XPNPEP2O43895 674 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 KLRC4O43908 158 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 AOC2O75106 756 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 TULP3O75386 442 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 CSF2P04141 144 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 ITGB5P18084 799 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 ZMYND11Q15326 602 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 TSTQ16762 297 aaKnown RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 TNFAIP8L2Q6P589 184 aaPredicted RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 DPYSL5Q9BPU6 564 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 COQ3Q9NZJ6 369 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 GTF2IRD1Q9UHL9 959 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 PPM1HQ9ULR3 514 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 H7C2Y5 167 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 AGPSO00116 658 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 DNAJA2O60884 412 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 TACR2P21452 398 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 CHRNA4P43681 627 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 OR3A3P47888 321 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 OR3A2P47893 321 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 OAZ1P54368 228 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 ADGRD1Q6QNK2 874 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 POGLUT1Q8NBL1 392 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 CLP1Q92989 425 aaKnown RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 PSMG2Q969U7 264 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 PYCR2Q96C36 320 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 TTYH2Q9BSA4 534 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 SAV1Q9H4B6 383 aaPredicted RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 MEMO1Q9Y316 297 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 SLC15A5A6NIM6 579 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 PRMT5O14744 637 aaPredicted RBP13.69□□□□□ -0.22
SPG11-210ENST00000558319 THEGLP0DJG4 465 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 RPS3P23396 243 aaKnown RBP eCLIP13.69□□□□□ -0.22
SPG11-210ENST00000558319 CSTF2P33240 577 aaKnown RBP eCLIP13.69□□□□□ -0.22
SPG11-210ENST00000558319 CBLBQ13191 982 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 GALNT11Q8NCW6 608 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 SLC38A4Q969I6 547 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 MTERF1Q99551 399 aaKnown RBP13.69□□□□□ -0.22
SPG11-210ENST00000558319 OR2AG1Q9H205 316 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 SRMSQ9H3Y6 488 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 NUDT15Q9NV35 164 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 TMEM88BA6NKF7 163 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 PLATP00750 562 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 GADD45AP24522 165 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 CDKN1CP49918 316 aaPredicted RBP13.69□□□□□ -0.22
SPG11-210ENST00000558319 ARSIQ5FYB1 569 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 OR10Q1Q8NGQ4 319 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 CPT1BQ92523 772 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 ZSWIM3Q96MP5 696 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 IL4I1Q96RQ9 567 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 IL12RB2Q99665 862 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 IFT27Q9BW83 186 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 LGR4Q9BXB1 951 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 MUC13Q9H3R2 512 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 FARSAQ9Y285 508 aaKnown RBP13.69□□□□□ -0.22
SPG11-210ENST00000558319 ZNF536O15090 1300 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 CLDN9O95484 217 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 ALPIP09923 528 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 STOMP27105 288 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 MAB21L1Q13394 359 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 ATXN7L3Q14CW9 347 aaPredicted RBP13.69□□□□□ -0.22
SPG11-210ENST00000558319 XYLT1Q86Y38 959 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 DOK4Q8TEW6 326 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 MCCC1Q96RQ3 725 aaPredicted RBP13.69□□□□□ -0.22
SPG11-210ENST00000558319 PHPT1Q9NRX4 125 aaPredicted RBP13.69□□□□□ -0.22
SPG11-210ENST00000558319 C12orf71A8MTZ7 269 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 PAX3P23760 479 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 ASMTP46597 345 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 NUDT6P53370 316 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 GRM2Q14416 872 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 CHRDL2Q6WN34 429 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 UNC93AQ86WB7 457 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 SERPINA9Q86WD7 417 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 MFSD3Q96ES6 412 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 ZNF649Q9BS31 505 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 RBCK1Q9BYM8 510 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 KCNMB3Q9NPA1 279 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 OAZ3Q9UMX2 235 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 C2orf92A0A1B0GVN3 265 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 ADAMDEC1O15204 470 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 RPP40O75818 363 aaKnown RBP13.69□□□□□ -0.22
SPG11-210ENST00000558319 GBAP04062 536 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 SLC6A9P48067 706 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 RPIAP49247 311 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 GTF2BQ00403 316 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 PRKCZQ05513 592 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 TMEM236Q5W0B7 351 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 MFSD5Q6N075 450 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 KCTD9Q7L273 389 aa13.69□□□□□ -0.22
SPG11-210ENST00000558319 CCDC28AQ8IWP9 274 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms