RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ENTPD4Q9Y227 616 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 NBEAL2Q6ZNJ1 2754 aa5.77□□□□□ -1.49
RTF1-204ENST00000558117 KLRF2D3W0D1 207 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 TMEM189-UBE2V1I3L0A0 370 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 I3L4J1 428 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 DDX39AO00148 427 aaKnown RBP5.76□□□□□ -1.49
RTF1-204ENST00000558117 SMAD6O43541 496 aaKnown RBP5.76□□□□□ -1.49
RTF1-204ENST00000558117 CLDN7O95471 211 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 SERPINC1P01008 464 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 CKMT2P17540 419 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 ACP1P24666 158 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 RBMS1P29558 406 aaKnown RBP5.76□□□□□ -1.49
RTF1-204ENST00000558117 TERF1P54274 439 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 NANOS2P60321 138 aaKnown RBP5.76□□□□□ -1.49
RTF1-204ENST00000558117 TBL3Q12788 808 aaKnown RBP5.76□□□□□ -1.49
RTF1-204ENST00000558117 NAA25Q14CX7 972 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 SHBQ15464 509 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 FAM133BQ5BKY9 247 aaKnown RBP5.76□□□□□ -1.49
RTF1-204ENST00000558117 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 FAAH2Q6GMR7 532 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 HEPHL1Q6MZM0 1159 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 KIAA1161Q6NSJ0 714 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 ZNF367Q7RTV3 350 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 DNAJB7Q7Z6W7 309 aaPredicted RBP5.76□□□□□ -1.49
RTF1-204ENST00000558117 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.76□□□□□ -1.49
RTF1-204ENST00000558117 ZDHHC23Q8IYP9 409 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 OR8H2Q8N162 312 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 EID2Q8N6I1 236 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 SAP25Q8TEE9 199 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 OIT3Q8WWZ8 545 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 RAB40AQ8WXH6 277 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 ZPBPQ9BS86 351 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 LHPPQ9H008 270 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 ZNF71Q9NQZ8 489 aaPredicted RBP5.76□□□□□ -1.49
RTF1-204ENST00000558117 TBC1D22BQ9NU19 505 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 WSB2Q9NYS7 404 aaPredicted RBP5.76□□□□□ -1.49
RTF1-204ENST00000558117 FBXL5Q9UKA1 691 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 HSF4Q9ULV5 492 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 FZD10Q9ULW2 581 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 MYO6Q9UM54 1294 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 SATB2Q9UPW6 733 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 TMEM98Q9Y2Y6 226 aa5.76□□□□□ -1.49
RTF1-204ENST00000558117 TDRD15B5MCY1 1934 aaKnown RBP5.76□□□□□ -1.49
RTF1-204ENST00000558117 LAD1O00515 517 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 PTGESO14684 152 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 CYTH3O43739 400 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 SLC25A17O43808 307 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 KIF1CO43896 1103 aaKnown RBP5.75□□□□□ -1.49
RTF1-204ENST00000558117 CSO75390 466 aaKnown RBP5.75□□□□□ -1.49
RTF1-204ENST00000558117 FGF19O95750 216 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 LCATP04180 440 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 ZFYP08048 801 aaPredicted RBP5.75□□□□□ -1.49
RTF1-204ENST00000558117 CHRM4P08173 479 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 KIF5BP33176 963 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 PRKG2Q13237 762 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 TGIF1Q15583 401 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 Q6ZSV7 163 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 BHLHA9Q7RTU4 235 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 HEATR4Q86WZ0 1026 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 DNAAF1Q8NEP3 725 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 BEST2Q8NFU1 509 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 B4GALNT2Q8NHY0 566 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 RUFY2Q8WXA3 655 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 CNOT9Q92600 299 aaKnown RBP5.75□□□□□ -1.49
RTF1-204ENST00000558117 PSMG2Q969U7 264 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 SH3KBP1Q96B97 665 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 APOLD1Q96LR9 279 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 CD180Q99467 661 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 GPR174Q9BXC1 333 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 SLC26A6Q9BXS9 759 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 DCLK3Q9C098 648 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 CXCL16Q9H2A7 254 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 KAT14Q9H8E8 782 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 KIF9Q9HAQ2 790 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 DUS2Q9NX74 493 aaKnown RBP5.75□□□□□ -1.49
RTF1-204ENST00000558117 ALKBH4Q9NXW9 302 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 SUCLA2Q9P2R7 463 aaPredicted RBP5.75□□□□□ -1.49
RTF1-204ENST00000558117 MAD2L2Q9UI95 211 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 ERRFI1Q9UJM3 462 aaPredicted RBP5.75□□□□□ -1.49
RTF1-204ENST00000558117 ANK2Q01484 3957 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 TLN2Q9Y4G6 2542 aa5.75□□□□□ -1.49
RTF1-204ENST00000558117 VPS13CQ709C8 3753 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 MXRA5Q9NR99 2828 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 A0A1W2PRQ8 180 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 OR6C75A6NL08 312 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 KRTAP29-1A8MX34 341 aaPredicted RBP5.74□□□□□ -1.49
RTF1-204ENST00000558117 INAFM1C9JVW0 142 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 LDB2O43679 373 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 DFNA5O60443 496 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 B3GAT3O94766 335 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 MYZAPP0CAP1 466 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 ENO3P13929 434 aaPredicted RBP5.74□□□□□ -1.49
RTF1-204ENST00000558117 YWHAQP27348 245 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 BRCC3P46736 316 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 ARSFP54793 590 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 CDH12P55289 794 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 ZP1P60852 638 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 SLC18A2Q05940 514 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.74□□□□□ -1.49
RTF1-204ENST00000558117 BFSP1Q12934 665 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms