RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SFRP1Q8N474 314 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 AFAP1L2Q8N4X5 818 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 TEX9Q8N6V9 391 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 OR56A3Q8NH54 315 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 MAPK15Q8TD08 544 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 ZNF480Q8WV37 535 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 ESAMQ96AP7 390 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 MED8Q96G25 268 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 NUSAP1Q9BXS6 441 aaKnown RBP16.37■□□□□ 0.21
SNX1-203ENST00000558040 ILKAPQ9H0C8 392 aaPredicted RBP16.37■□□□□ 0.21
SNX1-203ENST00000558040 ATG10Q9H0Y0 220 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 ACSS2Q9NR19 701 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 DNAJC11Q9NVH1 559 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 FGFR1OP2Q9NVK5 253 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 PSD3Q9NYI0 1048 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 CPNE7Q9UBL6 633 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 CIDEBQ9UHD4 219 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 PLAGL1Q9UM63 463 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.37■□□□□ 0.21
SNX1-203ENST00000558040 RAP2CQ9Y3L5 183 aa16.37■□□□□ 0.21
SNX1-203ENST00000558040 GON4LQ3T8J9 2241 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 TRBV23OR9-2A0A075B6M9 112 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 A0A1B0GTQ1 180 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 PKLRP30613 574 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 SHMT2P34897 504 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 GDF5P43026 501 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 RAB28P51157 221 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 SEC24CP53992 1094 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 CDH13P55290 713 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 UBE2IP63279 158 aaKnown RBP16.36■□□□□ 0.21
SNX1-203ENST00000558040 CYP2A13Q16696 494 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 HLA-BQ31612 363 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 LAIR1Q6GTX8 287 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 CPLX4Q7Z7G2 160 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 NAGSQ8N159 534 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 SNX31Q8N9S9 440 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 OR52E1Q8NGJ3 308 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 SLC37A2Q8TED4 501 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 TRPC4APQ8TEL6 797 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 GRAMD1AQ96CP6 724 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 NSUN5Q96P11 429 aaKnown RBP16.36■□□□□ 0.21
SNX1-203ENST00000558040 SORT1Q99523 831 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 CAAP1Q9H8G2 361 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 SEMA4BQ9NPR2 832 aaPredicted RBP16.36■□□□□ 0.21
SNX1-203ENST00000558040 CCDC177Q9NQR7 707 aaPredicted RBP16.36■□□□□ 0.21
SNX1-203ENST00000558040 ASB1Q9Y576 335 aa16.36■□□□□ 0.21
SNX1-203ENST00000558040 E7ENX8 843 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 ARHGAP33O14559 1287 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 OTCP00480 354 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 CHRNGP07510 517 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 TROVE2P10155 538 aaKnown RBP eCLIP16.35■□□□□ 0.21
SNX1-203ENST00000558040 EPHA8P29322 1005 aaPredicted RBP16.35■□□□□ 0.21
SNX1-203ENST00000558040 HK2P52789 917 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 PKNOX1P55347 436 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 TBPL1P62380 186 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 TAP2Q03519 686 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 BIRC2Q13490 618 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 DEFB133Q30KQ1 61 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 RPS27LQ71UM5 84 aaKnown RBP16.35■□□□□ 0.21
SNX1-203ENST00000558040 CUZD1Q86UP6 607 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 THOC6Q86W42 341 aaKnown RBP16.35■□□□□ 0.21
SNX1-203ENST00000558040 HOMEZQ8IX15 550 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 LSMEM2Q8N112 164 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 OR2L8Q8NGY9 312 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 HMGCLL1Q8TB92 370 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 LCN9Q8WX39 176 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 SMPDL3AQ92484 453 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 ATP6V1E2Q96A05 226 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 PYCR2Q96C36 320 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 MOCOSQ96EN8 888 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 IL17FQ96PD4 163 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 ZNF382Q96SR6 550 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 MIPEPQ99797 713 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 LRFN3Q9BTN0 628 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 MENTQ9BUN1 341 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 C20orf27Q9GZN8 174 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 FAM107BQ9H098 131 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 PCBD2Q9H0N5 130 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 ARRDC1-AS1Q9H2J1 176 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 IPPKQ9H8X2 491 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 SLC40A1Q9NP59 571 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 UCKL1Q9NWZ5 548 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 HAO1Q9UJM8 370 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 SLC22A14Q9Y267 594 aa16.35■□□□□ 0.21
SNX1-203ENST00000558040 ANKRD12Q6UB98 2062 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 KHNYNO15037 678 aaKnown RBP16.34■□□□□ 0.21
SNX1-203ENST00000558040 TGDSO95455 350 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 ALPPL2P10696 532 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 TSPAN8P19075 237 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 DRD4P21917 467 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 ARRB2P32121 409 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 ARL1P40616 181 aaPredicted RBP16.34■□□□□ 0.21
SNX1-203ENST00000558040 CCR10P46092 362 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 RPL14P50914 215 aaKnown RBP16.34■□□□□ 0.21
SNX1-203ENST00000558040 CCT8P50990 548 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 CCNG1P51959 295 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 HHEXQ03014 270 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 CDC16Q13042 620 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 TSTA3Q13630 321 aaPredicted RBP16.34■□□□□ 0.21
SNX1-203ENST00000558040 PLCL1Q15111 1095 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms