RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 ZNF148Q9UQR1 794 aa4.42□□□□□ -1.7
GPHN-215ENST00000557654 PTRH2Q9Y3E5 179 aaKnown RBP4.42□□□□□ -1.7
GPHN-215ENST00000557654 CDC42BPBQ9Y5S2 1711 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 SETBP1Q9Y6X0 1596 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 PTCH1Q13635 1447 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 XRCC3O43542 346 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 TPOP07202 933 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 HMBSP08397 361 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 HOXD13P35453 343 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 PNLIPRP2P54317 469 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 B3GALT5-AS1P59052 145 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 ADAMTSL4-AS1Q5T5F5 129 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 ZNF772Q68DY9 489 aaPredicted RBP4.41□□□□□ -1.7
GPHN-215ENST00000557654 PWWP2BQ6NUJ5 590 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 TEX38Q6PEX7 206 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 C4orf50Q6ZRC1 276 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 CREBRFQ8IUR6 639 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 PDCL2Q8N4E4 241 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 RNF128Q8TEB7 428 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 ARHGAP45Q92619 1136 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 SYAP1Q96A49 352 aaPredicted RBP4.41□□□□□ -1.7
GPHN-215ENST00000557654 SGK494Q96LW2 274 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 TIGD1Q96MW7 591 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 SDF4Q9BRK5 362 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 FNDC11Q9BVV2 318 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 VN1R1Q9GZP7 353 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 TSPY26PQ9H489 355 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 ADD3Q9UEY8 706 aaKnown RBP4.41□□□□□ -1.7
GPHN-215ENST00000557654 RASAL2Q9UJF2 1139 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 KIF3AQ9Y496 699 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 ABCA6Q8N139 1617 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 MAP3K4Q9Y6R4 1608 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 SYCP2Q9BX26 1530 aa4.41□□□□□ -1.7
GPHN-215ENST00000557654 VWDEQ8N2E2 1590 aa4.4□□□□□ -1.7
GPHN-215ENST00000557654 NSD3Q9BZ95 1437 aa4.4□□□□□ -1.7
GPHN-215ENST00000557654 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 IGHV4-61A0A0C4DH41 118 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 HYKKA2RU49 373 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 WDHD1O75717 1129 aaPredicted RBP4.4□□□□□ -1.71
GPHN-215ENST00000557654 EML2O95834 649 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 BCL10O95999 233 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 IGHV4-59P01825 116 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 NRIP1P48552 1158 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 TPD52P55327 224 aaPredicted RBP4.4□□□□□ -1.71
GPHN-215ENST00000557654 IRX1P78414 480 aaPredicted RBP4.4□□□□□ -1.71
GPHN-215ENST00000557654 KCNJ10P78508 379 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 GPR17Q13304 367 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 RRS1Q15050 365 aaKnown RBP4.4□□□□□ -1.71
GPHN-215ENST00000557654 IGSF11Q5DX21 431 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 MDH1BQ5I0G3 518 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 TMCO3Q6UWJ1 677 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 ITPRIPQ8IWB1 547 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 CEP57L1Q8IYX8 460 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 OR5M8Q8NGP6 311 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 FGFBP3Q8TAT2 258 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 GIMAP5Q96F15 307 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 NSL1Q96IY1 281 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 CDRT15Q96T59 188 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 SPATC1LQ9H0A9 340 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 ARRDC1-AS1Q9H2J1 176 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 TBC1D17Q9HA65 648 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 INTS9Q9NV88 658 aaKnown RBP4.4□□□□□ -1.71
GPHN-215ENST00000557654 TUBE1Q9UJT0 475 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 PPRC1Q5VV67 1664 aaKnown RBP4.4□□□□□ -1.71
GPHN-215ENST00000557654 ANKRD36BQ8N2N9 1353 aa4.4□□□□□ -1.71
GPHN-215ENST00000557654 DEPDC5O75140 1603 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 CD109Q6YHK3 1445 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 TET3O43151 1660 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 SYCE3A1L190 88 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 MEIOCA2RUB1 952 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 ADAMDEC1O15204 470 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 EXTL3O43909 919 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 RNF224P0DH78 156 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 TRIM21P19474 475 aaKnown RBP4.39□□□□□ -1.71
GPHN-215ENST00000557654 ACSL1P33121 698 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 CX3CL1P78423 397 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 CUL4AQ13619 759 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 TUBB2AQ13885 445 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 PLEKHS1Q5SXH7 462 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 LINC00346Q8IVM7 164 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 SCML4Q8N228 414 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 POC5Q8NA72 575 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 OR13J1Q8NGT2 312 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 OR2T11Q8NH01 316 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 OR2T6Q8NHC8 308 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 GMPPAQ96IJ6 420 aaPredicted RBP4.39□□□□□ -1.71
GPHN-215ENST00000557654 PLEKHF1Q96S99 279 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 OLFM1Q99784 485 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 TUBB2BQ9BVA1 445 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 S1PR5Q9H228 398 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 ATAD3AQ9NVI7 634 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 OSGIN1Q9UJX0 560 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 MTUS1Q9ULD2 1270 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 CDC42BPGQ6DT37 1551 aa4.39□□□□□ -1.71
GPHN-215ENST00000557654 FANCAO15360 1455 aa4.38□□□□□ -1.71
GPHN-215ENST00000557654 LOC101059948A0A1B0GTJ6 334 aa4.38□□□□□ -1.71
GPHN-215ENST00000557654 SH2B2O14492 632 aaPredicted RBP4.38□□□□□ -1.71
GPHN-215ENST00000557654 GAPDHSO14556 408 aaPredicted RBP4.38□□□□□ -1.71
GPHN-215ENST00000557654 ATP6V0E1O15342 81 aa4.38□□□□□ -1.71
GPHN-215ENST00000557654 PIGNO95427 931 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms