RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 GDAP1Q8TB36 358 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 IMP4Q96G21 291 aaKnown RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 TTC25Q96NG3 672 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 VPS35Q96QK1 796 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 SERINC2Q96SA4 455 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 CEP41Q9BYV8 373 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 GPR63Q9BZJ6 419 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 TSPYL1Q9H0U9 437 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 ZNF552Q9H707 407 aaPredicted RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 KIR3DX1Q9H7L2 352 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 ACTR5Q9H9F9 607 aaPredicted RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 FANCEQ9HB96 536 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 MAGEE1Q9HCI5 957 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 MRPL47Q9HD33 250 aaKnown RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 BPIFA1Q9NP55 256 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 SLC24A2Q9UI40 661 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 POMT2Q9UKY4 750 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 MYO6Q9UM54 1294 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 OSGIN2Q9Y236 505 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 PCDHGB3Q9Y5G1 929 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 SPO11Q9Y5K1 396 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 CSAG2Q9Y5P2 127 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 SEC16AO15027 2179 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 OR2AG2A6NM03 316 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 C9J4A7 227 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 J3KRW8 73 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 J3QW42 95 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 LDB2O43679 373 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 KCNJ13O60928 360 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 MSL3P1P0C860 447 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 NAT2P11245 290 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 HSD3B1P14060 373 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 ST6GAL1P15907 406 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 POLR2CP19387 275 aaPredicted RBP5.66□□□□□ -1.5
VPS33B-207ENST00000557470 HLA-DPA1P20036 260 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 CDH3P22223 829 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 SSR1P43307 286 aaKnown RBP5.66□□□□□ -1.5
VPS33B-207ENST00000557470 PREPP48147 710 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 LMAN1P49257 510 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 PER3P56645 1201 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 FOXL2P58012 376 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 RAC1P63000 192 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 IFI35P80217 286 aaPredicted RBP5.66□□□□□ -1.5
VPS33B-207ENST00000557470 PPIDQ08752 370 aaKnown RBP5.66□□□□□ -1.5
VPS33B-207ENST00000557470 KLHL30Q0D2K2 578 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 FAPQ12884 760 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 XRCC4Q13426 336 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 ZNF460Q14592 562 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 ASIC2Q16515 512 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 METRNLQ641Q3 311 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 TMEM220Q6QAJ8 160 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 C16orf54Q6UWD8 224 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 FAM151BQ6UXP7 276 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 KCNMB4Q86W47 210 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 CPNE8Q86YQ8 564 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 TMEM151BQ8IW70 566 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 KCTD6Q8NC69 237 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 DDHD1Q8NEL9 900 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 ANKRD20A12PQ8NF67 263 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 NAT14Q8WUY8 206 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 TM9SF4Q92544 642 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 TADA1Q96BN2 335 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 FAF2Q96CS3 445 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 HDAC11Q96DB2 347 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 HSPBAP1Q96EW2 488 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 RMDN2Q96LZ7 410 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 FER1L6-AS2Q96M78 137 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 C12orf66Q96MD2 445 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 ZNF830Q96NB3 372 aaPredicted RBP5.66□□□□□ -1.5
VPS33B-207ENST00000557470 IP6K3Q96PC2 410 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 NRTNQ99748 197 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 WDR77Q9BQA1 342 aaPredicted RBP5.66□□□□□ -1.5
VPS33B-207ENST00000557470 DPH2Q9BQC3 489 aaPredicted RBP5.66□□□□□ -1.5
VPS33B-207ENST00000557470 ZNF670Q9BS34 389 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 KLHL25Q9H0H3 589 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 WWP1Q9H0M0 922 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 ISCUQ9H1K1 167 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 HSD3B7Q9H2F3 369 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 IL26Q9NPH9 171 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 AGPAT4Q9NRZ5 378 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 P4HTMQ9NXG6 502 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 ANAPC7Q9UJX3 599 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 PADI2Q9Y2J8 665 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 PTRH2Q9Y3E5 179 aaKnown RBP5.66□□□□□ -1.5
VPS33B-207ENST00000557470 SVILO95425 2214 aa5.66□□□□□ -1.5
VPS33B-207ENST00000557470 MDC1Q14676 2089 aaKnown RBP5.65□□□□□ -1.5
VPS33B-207ENST00000557470 GSAPA4D1B5 854 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 MGAT4DA6NG13 374 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 TTC36A6NLP5 189 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 E7EQ34 232 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 PEX12O00623 359 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 GAPDHSO14556 408 aaPredicted RBP5.65□□□□□ -1.5
VPS33B-207ENST00000557470 PRODHO43272 600 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 ZNF749O43361 778 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 DYRK3O43781 588 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 UGT1A9O60656 530 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 CNOT3O75175 753 aaKnown RBP5.65□□□□□ -1.5
VPS33B-207ENST00000557470 ALOX12BO75342 701 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 PMPCBO75439 489 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 IPO13O94829 963 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms