RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 ZFP36L2P47974 494 aaKnown RBP8.93□□□□□ -0.98
NEDD1-211ENST00000557454 ARSFP54793 590 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 BPIFB4P59827 614 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 FASTKQ14296 549 aaKnown RBP8.93□□□□□ -0.98
NEDD1-211ENST00000557454 POU4F3Q15319 338 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 SLC25A35Q3KQZ1 300 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 FILIP1LQ4L180 1135 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 ATP13A5Q4VNC0 1218 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 CATSPEREQ5SY80 951 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 ZNF658Q5TYW1 1059 aaPredicted RBP8.93□□□□□ -0.98
NEDD1-211ENST00000557454 KAZNQ674X7 775 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 HEPHL1Q6MZM0 1159 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 BHLHB9Q6PI77 547 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 TMEM220Q6QAJ8 160 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 NOP9Q86U38 636 aaKnown RBP8.93□□□□□ -0.98
NEDD1-211ENST00000557454 HIPK1Q86Z02 1210 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 DNAJC22Q8N4W6 341 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 ATPAF2Q8N5M1 289 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 BEND7Q8N7W2 519 aaPredicted RBP8.93□□□□□ -0.98
NEDD1-211ENST00000557454 OR52E1Q8NGJ3 308 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 NSMCE1Q8WV22 266 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 MIEF2Q96C03 454 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 PERPQ96FX8 193 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 VPS35Q96QK1 796 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 POLR1EQ9GZS1 481 aaKnown RBP8.93□□□□□ -0.98
NEDD1-211ENST00000557454 CHRNA10Q9GZZ6 450 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 CUTCQ9NTM9 273 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 EURLQ9NYK6 297 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 NFKBIL1Q9UBC1 381 aaPredicted RBP8.93□□□□□ -0.98
NEDD1-211ENST00000557454 Q9UFV3 132 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 DNAJC12Q9UKB3 198 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 PLCL2Q9UPR0 1127 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 SHOC2Q9UQ13 582 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 TTLL3Q9Y4R7 772 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 ALG6Q9Y672 507 aa8.93□□□□□ -0.98
NEDD1-211ENST00000557454 DNAJC13O75165 2243 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 CLCA1A8K7I4 914 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 CFAP99D6REC4 459 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 TFECO14948 347 aaPredicted RBP8.92□□□□□ -0.98
NEDD1-211ENST00000557454 CNOT4O95628 575 aaKnown RBP8.92□□□□□ -0.98
NEDD1-211ENST00000557454 PIRTP0C851 137 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 MX2P20592 715 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 CXCR2P25025 360 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 RPL26P61254 145 aaKnown RBP8.92□□□□□ -0.98
NEDD1-211ENST00000557454 FANCCQ00597 558 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 SRSF2Q01130 221 aaKnown RBP8.92□□□□□ -0.98
NEDD1-211ENST00000557454 OCA2Q04671 838 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 PNOCQ13519 176 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 TUSC1Q2TAM9 212 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 PPP6R3Q5H9R7 873 aaPredicted RBP8.92□□□□□ -0.98
NEDD1-211ENST00000557454 ACER2Q5QJU3 275 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 KDELC1Q6UW63 502 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 AMIGO1Q86WK6 493 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 LILRA3Q8N6C8 439 aaPredicted RBP8.92□□□□□ -0.98
NEDD1-211ENST00000557454 SLC30A5Q8TAD4 765 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 NAT14Q8WUY8 206 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 SLCO2A1Q92959 643 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 RBM41Q96IZ5 413 aaKnown RBP8.92□□□□□ -0.98
NEDD1-211ENST00000557454 UTP23Q9BRU9 249 aaKnown RBP8.92□□□□□ -0.98
NEDD1-211ENST00000557454 SELENOOQ9BVL4 669 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 ATG10Q9H0Y0 220 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 SIX2Q9NPC8 291 aa8.92□□□□□ -0.98
NEDD1-211ENST00000557454 RPL26L1Q9UNX3 145 aaKnown RBP8.92□□□□□ -0.98
NEDD1-211ENST00000557454 A0A0J9YY10 115 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 EIF3CLB5ME19 914 aaKnown RBP8.91□□□□□ -0.98
NEDD1-211ENST00000557454 PSMA7O14818 248 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 GPR39O43194 453 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 POLBP06746 335 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 SP1P08047 785 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 UGT1A1P22309 533 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 CA4P22748 312 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 PON1P27169 355 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 RFC3P40938 356 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 ZNF143P52747 638 aaPredicted RBP8.91□□□□□ -0.98
NEDD1-211ENST00000557454 EMP2P54851 167 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 COPS2P61201 443 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 AP2B1P63010 937 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 KRT85P78386 507 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 DPYSQ14117 519 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 MAPKAPK3Q16644 382 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 EXOC3L4Q17RC7 722 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 CHRFAM7AQ494W8 412 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 GPRC6AQ5T6X5 926 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 SLC25A25Q6KCM7 469 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 BLOC1S3Q6QNY0 202 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 UNC5DQ6UXZ4 953 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 THSD4Q6ZMP0 1018 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 GBP6Q6ZN66 633 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 DENND1AQ8TEH3 1009 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 OR2A14Q96R47 310 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 FERD3LQ96RJ6 166 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 EIF3CQ99613 913 aaKnown RBP8.91□□□□□ -0.98
NEDD1-211ENST00000557454 OLFM1Q99784 485 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 CNPY3Q9BT09 278 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 HGH1Q9BTY7 390 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 ZCCHC2Q9C0B9 1178 aaKnown RBP8.91□□□□□ -0.98
NEDD1-211ENST00000557454 AMBRA1Q9C0C7 1298 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 ZNF700Q9H0M5 742 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 NLRC4Q9NPP4 1024 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 RAD18Q9NS91 495 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms