RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 SLC39A3Q9BRY0 314 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 MUC3BQ9H195 1237 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 RPF2Q9H7B2 306 aaKnown RBP7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 IPPKQ9H8X2 491 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 RAD18Q9NS91 495 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 FAIMQ9NVQ4 179 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 C1orf109Q9NX04 203 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 MTRRQ9UBK8 725 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 RPS6KA6Q9UK32 745 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 PSME2Q9UL46 239 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 BTRCQ9Y297 605 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 MAN2B2Q9Y2E5 1009 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 PRG3Q9Y2Y8 225 aaPredicted RBP7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 TPRKBQ9Y3C4 175 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 PCDHGA11Q9Y5H2 935 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 SPO11Q9Y5K1 396 aa7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 GCN1Q92616 2671 aaKnown RBP7.12□□□□□ -1.27
MTHFD1-215ENST00000557370 ZNF106Q9H2Y7 1883 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 A0A0J9YVX5 310 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 ASPDHA6ND91 283 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 TMEM8BA6NDV4 472 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 M0QX08 132 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 ANKRD28O15084 1053 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 CCNDBP1O95273 360 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 PGLSO95336 258 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 CLDN9O95484 217 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 TBX18O95935 607 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 IGSF6O95976 241 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 MT-CO1P00395 513 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 PGRP06401 933 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 DCNP07585 359 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 HMBSP08397 361 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 HIST1H2AGP0C0S8 130 aaPredicted RBP7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 MPC1LP0DKB6 136 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 ITGAMP11215 1152 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 SLC2A4P14672 509 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 ITIH1P19827 911 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 HIST1H2ADP20671 130 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 EEF1B2P24534 225 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 HRH2P25021 359 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 CORO1AP31146 461 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 GRK3P35626 688 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 ARL1P40616 181 aaPredicted RBP7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 CASP2P42575 452 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 NSG1P42857 185 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 MTHFRP42898 656 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 ZFP36L2P47974 494 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 CCR3P51677 355 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 PNLIPRP1P54315 467 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 AP1S2P56377 157 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 CLDN8P56748 225 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 C21orf59P57076 290 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 CREMQ03060 361 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 SRSF11Q05519 484 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 BCL2L1Q07817 233 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 CYP4F3Q08477 520 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 SPEM2Q0P670 501 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 DUSP4Q13115 394 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 CAMK1Q14012 370 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 KEAP1Q14145 624 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 IHHQ14623 411 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 RAB39AQ14964 217 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 RUNDC3AQ59EK9 446 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 RABL3Q5HYI8 236 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 CTSL3PQ5NE16 218 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 LRIF1Q5T3J3 769 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 RNF219Q5W0B1 726 aaPredicted RBP7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 SBSNQ6UWP8 590 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 Q6ZNX1 250 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 LYSMD3Q7Z3D4 306 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 GPR149Q86SP6 731 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 SERPINA11Q86U17 422 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 ITIH5Q86UX2 942 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 STK32CQ86UX6 486 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 NPAS4Q8IUM7 802 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 CPNE9Q8IYJ1 553 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 MICU2Q8IYU8 434 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 ZBTB2Q8N680 514 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 SMYD1Q8NB12 490 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 KLHL23Q8NBE8 558 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 SIDT2Q8NBJ9 832 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 PIK3C3Q8NEB9 887 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 OR7D4Q8NG98 312 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 OR4F6Q8NGB9 312 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 SPPL3Q8TCT6 385 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 CSGALNACT1Q8TDX6 532 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 CLP1Q92989 425 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 USP7Q93009 1102 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 FAM162AQ96A26 154 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 MYO19Q96H55 970 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 REXO5Q96IC2 774 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 COX4I2Q96KJ9 171 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 HIST1H2AHQ96KK5 128 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 KCNA7Q96RP8 456 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 HIST1H2AJQ99878 128 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 EGFL8Q99944 293 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 APOL4Q9BPW4 351 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 H2AFJQ9BTM1 129 aa7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 THUMPD3Q9BV44 507 aaKnown RBP7.11□□□□□ -1.27
MTHFD1-215ENST00000557370 EMILIN2Q9BXX0 1053 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms