RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 USP9YO00507 2555 aaPredicted RBP13.65□□□□□ -0.22
SNX6-210ENST00000557341 CLEC18AA5D8T8 446 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 ZNF185O15231 689 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 DPM1O60762 260 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 KLF7O75840 302 aaPredicted RBP13.64□□□□□ -0.23
SNX6-210ENST00000557341 SLCO2B1O94956 709 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 S1PR4O95977 384 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 CCDC175P0C221 793 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 CBSLP0DN79 551 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 CD9P21926 228 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 AOAHP28039 575 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 CBSP35520 551 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 FOLR3P41439 243 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 CRADDP78560 199 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 DCDP81605 110 aaKnown RBP13.64□□□□□ -0.23
SNX6-210ENST00000557341 KYNUQ16719 465 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 NADK2Q4G0N4 442 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 MLIPQ5VWP3 458 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 CLEC18BQ6UXF7 455 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 MRGPREQ86SM8 312 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 TAX1BP1Q86VP1 789 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 LRRC6Q86X45 466 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 DNAJC22Q8N4W6 341 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 OTUD6BQ8N6M0 293 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 CLEC18CQ8NCF0 446 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 OR2L8Q8NGY9 312 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 CPT1CQ8TCG5 803 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 NUDT9Q9BW91 350 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 SPRTNQ9H040 489 aaPredicted RBP13.64□□□□□ -0.23
SNX6-210ENST00000557341 TREX1Q9NSU2 369 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 INTS7Q9NVH2 962 aaKnown RBP13.64□□□□□ -0.23
SNX6-210ENST00000557341 BFARQ9NZS9 450 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.64□□□□□ -0.23
SNX6-210ENST00000557341 IFT80Q9P2H3 777 aaPredicted RBP13.64□□□□□ -0.23
SNX6-210ENST00000557341 DRG1Q9Y295 367 aaKnown RBP13.64□□□□□ -0.23
SNX6-210ENST00000557341 MRFAP1Q9Y605 127 aa13.64□□□□□ -0.23
SNX6-210ENST00000557341 SPTAN1Q13813 2472 aaKnown RBP13.64□□□□□ -0.23
SNX6-210ENST00000557341 ESPL1Q14674 2120 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 RASGRF2O14827 1237 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 KPNA5O15131 536 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 VPS4BO75351 444 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 NDUFS3O75489 264 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 SORBS2O94875 1100 aaKnown RBP13.63□□□□□ -0.23
SNX6-210ENST00000557341 FGGP02679 453 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 NPY2RP49146 381 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 SSPNQ14714 243 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 TTC23LQ6PF05 361 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 ZNF662Q6ZS27 426 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 OTOAQ7RTW8 1153 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 FAM20CQ8IXL6 584 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 RAB42Q8N4Z0 105 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 FAM26EQ8N5C1 309 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 TRIM58Q8NG06 486 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 OR2Y1Q8NGV0 311 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 DLG3Q92796 817 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 P2RY12Q9H244 342 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 MRM3Q9HC36 420 aaKnown RBP13.63□□□□□ -0.23
SNX6-210ENST00000557341 EURLQ9NYK6 297 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 CIDEBQ9UHD4 219 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 SLC39A10Q9ULF5 831 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 VPS4AQ9UN37 437 aa13.63□□□□□ -0.23
SNX6-210ENST00000557341 PTRH2Q9Y3E5 179 aaKnown RBP13.63□□□□□ -0.23
SNX6-210ENST00000557341 SPTBN1Q01082 2364 aaKnown RBP13.63□□□□□ -0.23
SNX6-210ENST00000557341 A6NL46 340 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 PEX12O00623 359 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 FKBP9O95302 570 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 IGHEP01854 428 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 CTSBP07858 339 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 TPSB2P20231 275 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 RPS3P23396 243 aaKnown RBP eCLIP13.62□□□□□ -0.23
SNX6-210ENST00000557341 NMBRP28336 390 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 EIF3BP55884 814 aaKnown RBP13.62□□□□□ -0.23
SNX6-210ENST00000557341 CDK16Q00536 496 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 GRB7Q14451 532 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 SLC9A5Q14940 896 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 TPSAB1Q15661 275 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 NKAIN1Q4KMZ8 207 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 RNF187Q5TA31 235 aaPredicted RBP13.62□□□□□ -0.23
SNX6-210ENST00000557341 MRNIPQ6NTE8 343 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 C2orf73Q8N5S3 287 aaPredicted RBP13.62□□□□□ -0.23
SNX6-210ENST00000557341 CLEC1AQ8NC01 280 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 DENND1AQ8TEH3 1009 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 SKA2Q8WVK7 121 aaPredicted RBP13.62□□□□□ -0.23
SNX6-210ENST00000557341 COL26A1Q96A83 441 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 RAD51AP1Q96B01 352 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 FER1L6-AS2Q96M78 137 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 IL17FQ96PD4 163 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 SMAD5Q99717 465 aaKnown RBP13.62□□□□□ -0.23
SNX6-210ENST00000557341 HOMER3Q9NSC5 361 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 SYBUQ9NX95 663 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 KLHL20Q9Y2M5 609 aa13.62□□□□□ -0.23
SNX6-210ENST00000557341 A0A1B0GX78 115 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 CYSRT1A8MQ03 144 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 PFDN6O15212 129 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 MGAT1P26572 445 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 BDKRB1P46663 353 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 UQCRFS1P47985 274 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 ARSFP54793 590 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 SF1Q15637 639 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms