RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 NHLH2Q02577 135 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 CACNG1Q06432 222 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 LMAN2Q12907 356 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 PRKAA1Q13131 559 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 GPM6BQ13491 265 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 ITGA9Q13797 1035 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 GALNT3Q14435 633 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 PCLAFQ15004 111 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 TEAD2Q15562 447 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 DLG2Q15700 870 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 SMAD1Q15797 465 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 TYSND1Q2T9J0 566 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 PLEKHG6Q3KR16 790 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 GPR33Q49SQ1 333 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 CARD16Q5EG05 197 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 PITRM1Q5JRX3 1037 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 CFAP157Q5JU67 520 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 LIPMQ5VYY2 423 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 PLPP4Q5VZY2 271 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 ZDHHC20Q5W0Z9 365 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 FAM91A1Q658Y4 838 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 UGT3A1Q6NUS8 523 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 TPGS1Q6ZTW0 290 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 TAS2R42Q7RTR8 314 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 PIWIL4Q7Z3Z4 852 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 GLT6D1Q7Z4J2 308 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 CLNKQ7Z7G1 428 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 TMEM25Q86YD3 366 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 SLC22A9Q8IVM8 553 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 ARID3BQ8IVW6 561 aaPredicted RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 CEP97Q8IW35 865 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 MFSD6LQ8IWD5 586 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 SUGP1Q8IWZ8 645 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 HOMEZQ8IX15 550 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 C10orf67Q8IYJ2 551 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 APCDD1Q8J025 514 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 STK40Q8N2I9 435 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 CBARPQ8N350 705 aaPredicted RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 FSTL5Q8N475 847 aaPredicted RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 RYBPQ8N488 228 aaPredicted RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 AFAP1L2Q8N4X5 818 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 NKAPQ8N5F7 415 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 CELF5Q8N6W0 485 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 PAF1Q8N7H5 531 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 EFHBQ8N7U6 833 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 ACVR1CQ8NER5 493 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 LPCAT1Q8NF37 534 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 OR4K2Q8NGD2 314 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 OR2AP1Q8NGE2 309 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 HCAR2Q8TDS4 363 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 HEXDCQ8WVB3 486 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 KCTD4Q8WVF5 259 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 C10orf82Q8WW14 230 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 STON2Q8WXE9 905 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 ASB10Q8WXI3 467 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 INPP5DQ92835 1189 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.4□□□□□ -1.71
SRP54-212ENST00000556992 NXNL1Q96CM4 212 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 KLHL29Q96CT2 875 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 THOC1Q96FV9 657 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 FAR2Q96K12 515 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 DNAJC1Q96KC8 554 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 RMDN2Q96LZ7 410 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 GPR78Q96P69 363 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 C17orf80Q9BSJ5 609 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 TRMOQ9BU70 441 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 MECRQ9BV79 373 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 TMEM120AQ9BXJ8 343 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 GPR63Q9BZJ6 419 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 DRC3Q9H069 523 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 MYLK2Q9H1R3 596 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 CCDC68Q9H2F9 335 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 TFB2MQ9H5Q4 396 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 SUDS3Q9H7L9 328 aaPredicted RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 TLE6Q9H808 572 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 MAN1C1Q9NR34 630 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 ARHGEF3Q9NR81 526 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 FBXO6Q9NRD1 293 aaPredicted RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 IGSF5Q9NSI5 407 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 MRGBPQ9NV56 204 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 DNAJC28Q9NX36 388 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 TAS2R13Q9NYV9 303 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 NCKIPSDQ9NZQ3 722 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 CPSF2Q9P2I0 782 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 LHX3Q9UBR4 397 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 APPL1Q9UKG1 709 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 TMCO1Q9UM00 188 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 SLC8A2Q9UPR5 921 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 HS3ST2Q9Y278 367 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 DNAJC16Q9Y2G8 782 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 RAP2CQ9Y3L5 183 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 CHST2Q9Y4C5 530 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 SPO11Q9Y5K1 396 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 ARL5AQ9Y689 179 aa4.4□□□□□ -1.71
SRP54-212ENST00000556992 KIAA0100Q14667 2235 aaKnown RBP4.4□□□□□ -1.71
SRP54-212ENST00000556992 COL4A4P53420 1690 aaPredicted RBP4.39□□□□□ -1.71
SRP54-212ENST00000556992 WDR81Q562E7 1941 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 A0A1W2PPC1 479 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 LCHNA4D1U4 455 aa4.39□□□□□ -1.71
SRP54-212ENST00000556992 TRPC5OSA6NMA1 111 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms