RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 DMGDHQ9UI17 866 aaKnown RBP10.33□□□□□ -0.76
LINC00239-201ENST00000556973 TSR3Q9UJK0 312 aaKnown RBP10.33□□□□□ -0.76
LINC00239-201ENST00000556973 PILRAQ9UKJ1 303 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 RARRES3Q9UL19 164 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 RUVBL2Q9Y230 463 aaKnown RBP10.33□□□□□ -0.76
LINC00239-201ENST00000556973 BTRCQ9Y297 605 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 TMEM184BQ9Y519 407 aaPredicted RBP10.33□□□□□ -0.76
LINC00239-201ENST00000556973 PCM1Q15154 2024 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 FREM2Q5SZK8 3169 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 A0A0J9YY10 115 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 TCRBV9S1A1TA0A576 114 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 ZNF839A8K0R7 811 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 ARHGEF33A8MVX0 844 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 MYO1CO00159 1063 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 PRICKLE3O43900 615 aaPredicted RBP10.32□□□□□ -0.76
LINC00239-201ENST00000556973 STK17BO94768 372 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 FKBP9O95302 570 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 C8GP07360 202 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 EBLN1P0CF75 366 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 FDXRP22570 491 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 BDKRB1P46663 353 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 TMPRSS3P57727 454 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 IL2P60568 153 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 TUBB4BP68371 445 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 TUBB3Q13509 450 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 MAP7Q14244 749 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 ARHGAP19Q14CB8 494 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 TGIF1Q15583 401 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 CYP2A13Q16696 494 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 CCSMST1Q4G0I0 132 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 C19orf48Q6RUI8 117 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 CAPN12Q6ZSI9 719 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 RELL1Q8IUW5 271 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 NLGN4XQ8N0W4 816 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 C2orf73Q8N5S3 287 aaPredicted RBP10.32□□□□□ -0.76
LINC00239-201ENST00000556973 NLGN4YQ8NFZ3 816 aaPredicted RBP10.32□□□□□ -0.76
LINC00239-201ENST00000556973 IFT81Q8WYA0 676 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 ZUFSPQ96AP4 578 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 ZNF501Q96CX3 271 aaPredicted RBP10.32□□□□□ -0.76
LINC00239-201ENST00000556973 ELMO2Q96JJ3 720 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 IL17FQ96PD4 163 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 CCNL2Q96S94 520 aaPredicted RBP10.32□□□□□ -0.76
LINC00239-201ENST00000556973 MCMBPQ9BTE3 642 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 FANCEQ9HB96 536 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 SMYD2Q9NRG4 433 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.32□□□□□ -0.76
LINC00239-201ENST00000556973 TXNDC16Q9P2K2 825 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 CIDEBQ9UHD4 219 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 SERTAD3Q9UJW9 196 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 PSAT1Q9Y617 370 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 SDK2Q58EX2 2172 aa10.32□□□□□ -0.76
LINC00239-201ENST00000556973 FAM159BA6NKW6 160 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 CXorf49A8MYA2 514 aaPredicted RBP10.31□□□□□ -0.76
LINC00239-201ENST00000556973 TARM1B6A8C7 271 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 SLC16A5O15375 505 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 MT-ND3P03897 115 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 ERGP11308 486 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 PVRP15151 417 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 OAS2P29728 719 aaKnown RBP10.31□□□□□ -0.76
LINC00239-201ENST00000556973 PEBP1P30086 187 aaKnown RBP10.31□□□□□ -0.76
LINC00239-201ENST00000556973 STX2P32856 288 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 ATP1A2P50993 1020 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 SF1Q15637 639 aaKnown RBP10.31□□□□□ -0.76
LINC00239-201ENST00000556973 GPR19Q15760 415 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 COL28A1Q2UY09 1125 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.31□□□□□ -0.76
LINC00239-201ENST00000556973 MANEAQ5SRI9 462 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 PWWP2BQ6NUJ5 590 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 CCDC81Q6ZN84 652 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 UBE2R2Q712K3 238 aaPredicted RBP10.31□□□□□ -0.76
LINC00239-201ENST00000556973 CACNA2D3Q8IZS8 1091 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 MYO1HQ8N1T3 1032 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 IL22RA1Q8N6P7 574 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 C19orf47Q8N9M1 422 aaKnown RBP10.31□□□□□ -0.76
LINC00239-201ENST00000556973 MCOLN3Q8TDD5 553 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 DENND1AQ8TEH3 1009 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 PDLIM5Q96HC4 596 aaKnown RBP10.31□□□□□ -0.76
LINC00239-201ENST00000556973 PKP4Q99569 1192 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 OLFM1Q99784 485 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 CPNE1Q99829 537 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 SLC12A9Q9BXP2 914 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 ULBP3Q9BZM4 244 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 RHOJQ9H4E5 214 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 PARVBQ9HBI1 364 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 POPDC3Q9HBV1 291 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 INTS7Q9NVH2 962 aaKnown RBP10.31□□□□□ -0.76
LINC00239-201ENST00000556973 ZFHX4Q86UP3 3567 aa10.31□□□□□ -0.76
LINC00239-201ENST00000556973 FAM95CA0A1B0GW59 222 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 RAD1O60671 282 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 KIAA0754O94854 1291 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 DLGAP3O95886 979 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 SYF2O95926 243 aaKnown RBP10.3□□□□□ -0.76
LINC00239-201ENST00000556973 HIST1H2AGP0C0S8 130 aaPredicted RBP10.3□□□□□ -0.76
LINC00239-201ENST00000556973 CCNYL3P0C7X3 344 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 ZNF28P17035 718 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 HIST1H2ADP20671 130 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 CYP2A7P20853 494 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 PHBP35232 272 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 GP5P40197 560 aa10.3□□□□□ -0.76
LINC00239-201ENST00000556973 PNLIPRP1P54315 467 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms